logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002533_01515

You are here: Home > Sequence: MGYG000002533_01515

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vibrio vulnificus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio vulnificus
CAZyme ID MGYG000002533_01515
CAZy Family CBM5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1205 MGYG000002533_3|CGC1 131257.23 4.3306
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002533 4933179 Isolate Bangladesh Asia
Gene Location Start: 148909;  End: 152526  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002533_01515.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd12204 CBD_like 1.60e-16 457 503 1 47
Cellulose-binding domain, chitinase and related proteins. This group contains proteins related to the cellulose-binding domain of Erwinia chrysanthemi endoglucanase Z (EGZ) and Serratia marcescens chitinase B (ChiB). Gram negative plant parasite Erwinia chrysanthemi produces a variety of depolymerizing enzymes to metabolize pectin and cellulose on the host plant. Cellulase EGZ has a modular structure, with N-terminal catalytic domain linked to a C-terminal cellulose-binding domain (CBD). CBD mediates the secretion activity of EGZ. Chitinases allow certain bacteria to utilize chitin as a energy source. Typically, non-plant chitinases are of the glycosidase family 18.
pfam14600 CBM_5_12_2 3.10e-15 453 507 1 62
Cellulose-binding domain. This C-terminal domain belongs to the CAZy family of carbohydrate-binding domains that are associated with glycosyl-hydrolases. It is suggested to bind cellulose.
pfam17957 Big_7 1.70e-06 158 222 3 67
Bacterial Ig domain. This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes.
pfam17957 Big_7 8.92e-06 354 423 1 67
Bacterial Ig domain. This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes.
pfam17957 Big_7 4.33e-05 257 324 2 67
Bacterial Ig domain. This entry represents a bacterial ig-like domain that is found in glycosyl hydrolase enzymes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIL73261.1 0.0 1 1205 1 1205
QBN15830.1 0.0 1 1205 1 1205
AAO07745.2 0.0 1 1205 1 1205
AMG10435.1 0.0 1 1205 1 1205
AUJ36769.1 0.0 1 1205 1 1205

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1AIW_A 1.46e-08 454 507 2 62
NMRSTRUCTURES OF THE CELLULOSE-BINDING DOMAIN OF THE ENDOGLUCANASE Z FROM ERWINIA CHRYSANTHEMI, 23 STRUCTURES [Dickeya dadantii 3937]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000351 0.998729 0.000226 0.000230 0.000222 0.000203

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002533_01515.