Species | Vibrio vulnificus | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio vulnificus | |||||||||||
CAZyme ID | MGYG000002533_03266 | |||||||||||
CAZy Family | PL22 | |||||||||||
CAZyme Description | Oligogalacturonate lyase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 131869; End: 133035 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
PL22 | 215 | 382 | 2.6e-81 | 0.630188679245283 |
PL22 | 30 | 134 | 3.8e-32 | 0.3886792452830189 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
pfam14583 | Pectate_lyase22 | 0.0 | 1 | 386 | 1 | 386 | Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers. |
COG0823 | TolB | 1.95e-33 | 1 | 376 | 58 | 420 | Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport]. |
PRK00178 | tolB | 6.40e-07 | 245 | 383 | 206 | 319 | Tol-Pal system protein TolB. |
PRK01742 | tolB | 1.24e-04 | 43 | 83 | 255 | 295 | Tol-Pal system protein TolB. |
PRK04792 | tolB | 2.64e-04 | 224 | 378 | 206 | 333 | Tol-Pal system protein TolB. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QMV39057.1 | 8.67e-303 | 1 | 388 | 1 | 388 |
BAC97404.1 | 2.48e-302 | 1 | 388 | 1 | 388 |
AMG10359.1 | 2.48e-302 | 1 | 388 | 1 | 388 |
AIL73340.1 | 2.48e-302 | 1 | 388 | 1 | 388 |
AUJ36683.1 | 2.48e-302 | 1 | 388 | 1 | 388 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3C5M_A | 4.60e-274 | 2 | 388 | 2 | 388 | Crystalstructure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_B Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_C Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633] |
3PE7_A | 6.42e-217 | 1 | 383 | 1 | 383 | Oligogalacturonatelyase in complex with manganese [Yersinia enterocolitica subsp. enterocolitica 8081] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P21258 | 9.58e-214 | 1 | 383 | 1 | 383 | Oligogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=ogl PE=2 SV=2 |
Q59418 | 9.60e-207 | 1 | 383 | 1 | 383 | Oligogalacturonide lyase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=ogl PE=4 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000038 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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