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CAZyme Information: MGYG000002533_03268

You are here: Home > Sequence: MGYG000002533_03268

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Vibrio vulnificus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Vibrionaceae; Vibrio; Vibrio vulnificus
CAZyme ID MGYG000002533_03268
CAZy Family PL9
CAZyme Description Pectate disaccharide-lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
743 MGYG000002533_8|CGC3 81080.32 5.4825
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002533 4933179 Isolate Bangladesh Asia
Gene Location Start: 135161;  End: 137392  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.9

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 382 699 9.1e-106 0.864

CDD Domains      help

MGYG000002533_03268 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAC97406.1 0.0 1 743 1 743
ANH66082.1 0.0 1 743 1 743
ALM73720.1 0.0 1 743 1 743
ARN68785.1 0.0 1 743 1 743
AMG10357.1 0.0 1 743 1 743

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 9.69e-32 384 709 18 347
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P22751 1.16e-204 19 695 25 688
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A7 7.96e-31 384 709 43 372
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P0C1A6 4.80e-30 384 709 43 372
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000237 0.999025 0.000190 0.000181 0.000174 0.000158

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002533_03268.