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CAZyme Information: MGYG000002534_00510

You are here: Home > Sequence: MGYG000002534_00510

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter_A farmeri
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_A; Citrobacter_A farmeri
CAZyme ID MGYG000002534_00510
CAZy Family GT51
CAZyme Description Biosynthetic peptidoglycan transglycosylase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
239 MGYG000002534_1|CGC13 26713.96 10.4938
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002534 5715629 Isolate Australia Oceania
Gene Location Start: 528512;  End: 529231  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.129

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT51 58 225 2e-56 0.943502824858757

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00056 mtgA 3.40e-147 2 237 1 236
monofunctional biosynthetic peptidoglycan transglycosylase; Provisional
TIGR02070 mono_pep_trsgly 8.89e-97 5 230 1 224
monofunctional biosynthetic peptidoglycan transglycosylase. This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG0744 MrcB 2.52e-85 4 236 19 252
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis].
pfam00912 Transgly 3.52e-72 57 225 9 177
Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
TIGR02074 PBP_1a_fam 1.22e-47 63 228 4 169
penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AST78057.1 7.75e-172 1 239 1 239
QPB32846.1 2.59e-170 1 239 1 239
QZA36900.1 2.59e-170 1 239 1 239
QZE45327.1 5.24e-170 1 239 1 239
AMG55919.1 7.44e-170 1 239 1 239

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2OQO_A 9.87e-29 63 228 22 187
Crystalstructure of a peptidoglycan glycosyltransferase from a class A PBP: insight into bacterial cell wall synthesis [Aquifex aeolicus VF5],3D3H_A Crystal structure of a complex of the peptidoglycan glycosyltransferase domain from Aquifex aeolicus and neryl moenomycin A [Aquifex aeolicus],3NB7_A Crystal structure of Aquifex Aeolicus Peptidoglycan Glycosyltransferase in complex with Decarboxylated Neryl Moenomycin [Aquifex aeolicus]
3NB6_A 3.85e-28 63 228 22 187
Crystalstructure of Aquifex aeolicus peptidoglycan glycosyltransferase in complex with Methylphosphoryl Neryl Moenomycin [Aquifex aeolicus]
4OON_A 2.92e-22 76 228 54 206
Crystalstructure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid) [Pseudomonas aeruginosa PAO1]
5U2G_A 1.55e-20 76 201 55 180
2.6Angstrom Resolution Crystal Structure of Penicillin-Binding Protein 1A from Haemophilus influenzae [Haemophilus influenzae Rd KW20],5U2G_B 2.6 Angstrom Resolution Crystal Structure of Penicillin-Binding Protein 1A from Haemophilus influenzae [Haemophilus influenzae Rd KW20]
7U4H_A 3.78e-18 64 204 43 181
ChainA, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX],7U4H_B Chain B, Penicillin-binding protein 1A (Pbp1a) [Chlamydia trachomatis D/UW-3/CX]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A8AQ99 2.29e-152 1 239 1 242
Biosynthetic peptidoglycan transglycosylase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=mtgA PE=3 SV=1
Q32BC5 9.95e-147 5 238 8 241
Biosynthetic peptidoglycan transglycosylase OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=mtgA PE=3 SV=1
C4ZSU7 2.85e-146 5 238 8 241
Biosynthetic peptidoglycan transglycosylase OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=mtgA PE=3 SV=1
P46022 2.85e-146 5 238 8 241
Biosynthetic peptidoglycan transglycosylase OS=Escherichia coli (strain K12) OX=83333 GN=mtgA PE=1 SV=1
B7M0S6 2.85e-146 5 238 8 241
Biosynthetic peptidoglycan transglycosylase OS=Escherichia coli O8 (strain IAI1) OX=585034 GN=mtgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.993514 0.001703 0.000129 0.000012 0.000006 0.004657

TMHMM  Annotations      download full data without filtering help

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