You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002534_05069
You are here: Home > Sequence: MGYG000002534_05069
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Citrobacter_A farmeri | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_A; Citrobacter_A farmeri | |||||||||||
| CAZyme ID | MGYG000002534_05069 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 146704; End: 147243 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13400 | LT_IagB-like | 9.75e-36 | 30 | 140 | 1 | 109 | Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
| PRK13888 | PRK13888 | 3.21e-21 | 23 | 179 | 19 | 178 | conjugal transfer protein TrbN; Provisional |
| PRK15328 | PRK15328 | 1.79e-13 | 19 | 161 | 18 | 148 | type III secretion system invasion protein IagB. |
| pfam01464 | SLT | 0.006 | 26 | 127 | 4 | 100 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXN77054.1 | 3.56e-136 | 1 | 179 | 1 | 179 |
| AWR71686.1 | 3.56e-136 | 1 | 179 | 1 | 179 |
| QQI72765.1 | 3.56e-136 | 1 | 179 | 1 | 179 |
| API82481.1 | 3.56e-136 | 1 | 179 | 1 | 179 |
| AXQ32282.1 | 3.56e-136 | 1 | 179 | 1 | 179 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E1WAC2 | 3.69e-07 | 19 | 140 | 18 | 141 | Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1 |
| P0CL15 | 3.69e-07 | 19 | 140 | 18 | 141 | Invasion protein IagB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iagB PE=3 SV=1 |
| P43018 | 5.11e-07 | 19 | 140 | 18 | 141 | Invasion protein IagB OS=Salmonella typhi OX=90370 GN=iagB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000060 | 0.000005 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |