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CAZyme Information: MGYG000002537_00447
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Kocuria rhizophila | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Kocuria; Kocuria rhizophila | |||||||||||
| CAZyme ID | MGYG000002537_00447 | |||||||||||
| CAZy Family | GT0 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 82818; End: 84731 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam13524 | Glyco_trans_1_2 | 1.48e-19 | 305 | 399 | 1 | 93 | Glycosyl transferases group 1. |
| COG4641 | COG4641 | 9.30e-17 | 114 | 411 | 78 | 369 | Spore maturation protein CgeB [Cell cycle control, cell division, chromosome partitioning]. |
| pfam12996 | DUF3880 | 1.76e-08 | 161 | 234 | 1 | 77 | DUF based on E. rectale Gene description (DUF3880). Based on Eubacterium rectale gene EUBREC_3218. As seen in gene expression experiments (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE14737), It appears to be upregulated in the presence of Bacteroides thetaiotaomicron vs when isolated in culture. |
| pfam00535 | Glycos_transf_2 | 3.14e-08 | 421 | 566 | 8 | 164 | Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids. |
| COG0463 | WcaA | 5.27e-06 | 411 | 606 | 2 | 229 | Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VEH75118.1 | 0.0 | 1 | 637 | 1 | 638 |
| BAG29604.1 | 0.0 | 1 | 637 | 1 | 638 |
| ASE10509.2 | 0.0 | 14 | 637 | 1 | 625 |
| QQQ64246.1 | 1.05e-242 | 9 | 637 | 10 | 640 |
| CEA08462.1 | 1.21e-242 | 11 | 637 | 8 | 634 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000025 | 0.000022 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |