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CAZyme Information: MGYG000002537_01566

You are here: Home > Sequence: MGYG000002537_01566

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Kocuria rhizophila
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Kocuria; Kocuria rhizophila
CAZyme ID MGYG000002537_01566
CAZy Family GH65
CAZyme Description putative glycosyl hydrolase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1118 MGYG000002537_12|CGC1 124189.98 5.2376
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002537 2636961 Isolate India Asia
Gene Location Start: 51611;  End: 54967  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.282 2.4.1.216

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH65 613 1023 4.2e-119 0.9946236559139785

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1554 ATH1 0.0 283 1093 9 771
Trehalose and maltose hydrolase (possible phosphorylase) [Carbohydrate transport and metabolism].
pfam03632 Glyco_hydro_65m 2.45e-127 613 1026 1 387
Glycosyl hydrolase family 65 central catalytic domain. This family of glycosyl hydrolases contains vacuolar acid trehalase and maltose phosphorylase.Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucleophilic attack on the anomeric carbon atom. The catalytic domain also forms the majority of the dimerization interface.
PRK13807 PRK13807 3.61e-69 283 1090 8 756
maltose phosphorylase; Provisional
pfam03636 Glyco_hydro_65N 5.03e-60 288 551 1 240
Glycosyl hydrolase family 65, N-terminal domain. This family of glycosyl hydrolases contains vacuolar acid trehalase and maltose phosphorylase.Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. This domain is believed to be essential for catalytic activity although its precise function remains unknown.
TIGR02009 PGMB-YQAB-SF 5.46e-40 33 232 1 167
beta-phosphoglucomutase family hydrolase. This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTK31076.1 0.0 1 1118 1 1118
ASE12076.1 0.0 1 1116 1 1115
BAG30148.1 0.0 1 1116 1 1115
VEH74583.1 0.0 1 1116 1 1115
QMS56583.1 0.0 1 1118 1 1118

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3WIQ_A 6.20e-84 301 1082 22 756
Crystalstructure of kojibiose phosphorylase complexed with kojibiose [Caldicellulosiruptor saccharolyticus DSM 8903],3WIR_A Crystal structure of kojibiose phosphorylase complexed with glucose [Caldicellulosiruptor saccharolyticus DSM 8903],3WIR_B Crystal structure of kojibiose phosphorylase complexed with glucose [Caldicellulosiruptor saccharolyticus DSM 8903],3WIR_C Crystal structure of kojibiose phosphorylase complexed with glucose [Caldicellulosiruptor saccharolyticus DSM 8903],3WIR_D Crystal structure of kojibiose phosphorylase complexed with glucose [Caldicellulosiruptor saccharolyticus DSM 8903]
1H54_A 9.45e-46 285 1078 10 746
ChainA, Maltose Phosphorylase [Levilactobacillus brevis],1H54_B Chain B, Maltose Phosphorylase [Levilactobacillus brevis]
7FE3_A 2.97e-25 573 812 273 484
ChainA, Candidate alpha glycoside phosphorylase Glycoside hydrolase family 65 [Flavobacterium johnsoniae UW101],7FE3_B Chain B, Candidate alpha glycoside phosphorylase Glycoside hydrolase family 65 [Flavobacterium johnsoniae UW101],7FE3_C Chain C, Candidate alpha glycoside phosphorylase Glycoside hydrolase family 65 [Flavobacterium johnsoniae UW101],7FE4_A Chain A, Candidate alpha glycoside phosphorylase Glycoside hydrolase family 65 [Flavobacterium johnsoniae UW101],7FE4_B Chain B, Candidate alpha glycoside phosphorylase Glycoside hydrolase family 65 [Flavobacterium johnsoniae UW101],7FE4_C Chain C, Candidate alpha glycoside phosphorylase Glycoside hydrolase family 65 [Flavobacterium johnsoniae UW101]
3NAS_A 2.98e-17 35 277 4 210
Thecrystal structure of beta-phosphoglucomutase from Bacillus subtilis [Bacillus subtilis],3NAS_B The crystal structure of beta-phosphoglucomutase from Bacillus subtilis [Bacillus subtilis]
1O03_A 2.23e-15 33 239 2 177
Structureof Pentavalent Phosphorous Intermediate of an Enzyme Catalyzed Phosphoryl transfer Reaction observed on cocrystallization with Glucose 6-phosphate [Lactococcus lactis],1O08_A Structure of Pentavalent Phosphorous Intermediate of an Enzyme Catalyzed Phosphoryl transfer Reaction observed on cocrystallization with Glucose 1-phosphate [Lactococcus lactis],1Z4N_A Structure of beta-phosphoglucomutase with inhibitor bound alpha-galactose 1-phosphate cocrystallized with Fluoride [Lactococcus lactis],1Z4N_B Structure of beta-phosphoglucomutase with inhibitor bound alpha-galactose 1-phosphate cocrystallized with Fluoride [Lactococcus lactis],1Z4O_A Structure of beta-phosphoglucomutase with inhibitor bound alpha-galactose 1-phosphate [Lactococcus lactis],1Z4O_B Structure of beta-phosphoglucomutase with inhibitor bound alpha-galactose 1-phosphate [Lactococcus lactis],1ZOL_A native beta-PGM [Lactococcus lactis],2WF5_A Structure of Beta-Phosphoglucomutase inhibited with Glucose-6-phosphate and trifluoromagnesate [Lactococcus lactis],2WF6_A Structure of Beta-Phosphoglucomutase inhibited with Glucose-6-phosphate and Aluminium tetrafluoride [Lactococcus lactis],2WF7_A Structure of Beta-Phosphoglucomutase inhibited with Glucose-6- phosphonate and Aluminium tetrafluoride [Lactococcus lactis],2WF8_A Structure of Beta-Phosphoglucomutase inhibited with Glucose-6- phosphate, Glucose-1-phosphate and Beryllium trifluoride [Lactococcus lactis],2WF9_A Structure of Beta-Phosphoglucomutase inhibited with Glucose-6- phosphate, and Beryllium trifluoride, crystal form 2 [Lactococcus lactis],2WFA_A Structure of Beta-Phosphoglucomutase inhibited with Beryllium trifluoride, in an open conformation. [Lactococcus lactis],2WHE_A Structure of native Beta-Phosphoglucomutase in an open conformation without bound ligands. [Lactococcus lactis],3ZI4_A The structure of Beta-phosphoglucomutase Inhibited With Glucose-6-phosphate and Scandium Tetrafluoride [Lactococcus lactis],4C4R_A Structure of beta-phosphoglucomutase in complex with a phosphonate analogue of beta-glucose-1-phosphate and magnesium trifluoride [Lactococcus lactis],4C4S_A Structure of beta-phosphoglucomutase in complex with an alpha- fluorophosphonate analogue of beta-glucose-1-phosphate and magnesium trifluoride [Lactococcus lactis],4C4T_A Structure of beta-phosphoglucomutase in complex with a phosphonate analogue of beta-glucose-1-phosphate and aluminium tetrafluoride [Lactococcus lactis],6H8U_A Beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 1.9 A. [Lactococcus lactis subsp. lactis Il1403],6H8V_A Beta-phosphoglucomutase from Lactococcus lactis in an open conformer in the P21 spacegroup to 1.8 A. [Lactococcus lactis subsp. lactis Il1403],6H8V_B Beta-phosphoglucomutase from Lactococcus lactis in an open conformer in the P21 spacegroup to 1.8 A. [Lactococcus lactis subsp. lactis Il1403],6H8W_A Beta-phosphoglucomutase from Lactococcus lactis in an open conformer complexed with aluminium tetrafluoride to 1.9 A. [Lactococcus lactis subsp. lactis Il1403],6H8X_A Beta-phosphoglucomutase from Lactococcus lactis in an open conformer complexed with magnesium trifluoride to 1.8 A. [Lactococcus lactis subsp. lactis Il1403],6H8X_B Beta-phosphoglucomutase from Lactococcus lactis in an open conformer complexed with magnesium trifluoride to 1.8 A. [Lactococcus lactis subsp. lactis Il1403],6H93_A Beta-phosphoglucomutase from Lactococcus lactis with inorganic phosphate bound in an open conformer to 1.8 A. [Lactococcus lactis subsp. lactis Il1403],6H93_B Beta-phosphoglucomutase from Lactococcus lactis with inorganic phosphate bound in an open conformer to 1.8 A. [Lactococcus lactis subsp. lactis Il1403],6QZG_A Beta-glucose 1,6-bisphosphonate bound to wild type beta-phosphoglucomutse in an open conformation. [Lactococcus lactis subsp. lactis Il1403],6QZG_B Beta-glucose 1,6-bisphosphonate bound to wild type beta-phosphoglucomutse in an open conformation. [Lactococcus lactis subsp. lactis Il1403],6YDL_A Substrate-free beta-phosphoglucomutase from Lactococcus lactis [Lactococcus lactis subsp. lactis Il1403],6YDM_A beta-phosphoglucomutase from Lactococcus lactis with citrate, tris and acetate bound [Lactococcus lactis subsp. lactis Il1403],6YDM_B beta-phosphoglucomutase from Lactococcus lactis with citrate, tris and acetate bound [Lactococcus lactis subsp. lactis Il1403]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P9WN14 1.04e-194 143 1090 397 1323
Uncharacterized glycosyl hydrolase MT2062 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2062 PE=2 SV=1
P9WN15 1.04e-194 143 1090 397 1323
Uncharacterized glycosyl hydrolase Rv2006 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2006 PE=1 SV=1
Q9CID5 2.67e-117 300 1085 22 761
Trehalose 6-phosphate phosphorylase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=trePP PE=1 SV=3
Q8RBL8 4.92e-82 282 1082 13 771
Kojibiose phosphorylase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=kojP PE=3 SV=1
Q8L163 3.59e-78 266 1052 4 745
Kojibiose phosphorylase OS=Thermoanaerobacter brockii OX=29323 GN=kojP PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000031 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002537_01566.