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CAZyme Information: MGYG000002539_01886

You are here: Home > Sequence: MGYG000002539_01886

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella aerofaciens_A
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella aerofaciens_A
CAZyme ID MGYG000002539_01886
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000002539_1|CGC22 78991.84 4.901
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002539 2306349 Isolate India Asia
Gene Location Start: 2165496;  End: 2167661  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002539_01886.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 328 1.4e-78 0.9791666666666666
CE19 457 698 4.7e-26 0.5993975903614458

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 1.65e-64 18 330 94 404
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 1.68e-49 16 311 10 275
Pectinesterase.
PLN02773 PLN02773 1.06e-41 10 322 9 290
pectinesterase
PLN02708 PLN02708 4.09e-41 16 336 251 550
Probable pectinesterase/pectinesterase inhibitor
PLN02432 PLN02432 9.13e-41 7 319 12 277
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54718.1 0.0 1 721 1 721
QIA34433.1 0.0 1 719 1 719
QUC03567.1 0.0 9 717 8 711
QRP39805.1 8.93e-105 10 336 20 349
ASN95501.1 8.93e-105 10 336 20 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3UW0_A 1.66e-25 18 288 44 310
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
1XG2_A 2.48e-25 10 315 7 284
ChainA, Pectinesterase 1 [Solanum lycopersicum]
5C1E_A 1.64e-23 15 278 16 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 3.01e-23 15 278 16 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2NSP_A 1.14e-22 18 288 18 286
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 5.08e-36 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q9LVQ0 4.52e-29 6 322 5 290
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q43043 7.23e-29 10 334 61 359
Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1
Q9FM79 1.46e-28 22 334 92 377
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q43062 2.08e-28 10 310 211 482
Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002539_01886.