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CAZyme Information: MGYG000002540_00177

You are here: Home > Sequence: MGYG000002540_00177

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paraprevotella clara
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella clara
CAZyme ID MGYG000002540_00177
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
935 MGYG000002540_3|CGC1 105195.64 4.7901
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002540 4187245 Isolate not provided not provided
Gene Location Start: 15871;  End: 18678  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002540_00177.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 402 538 3.9e-18 0.7074468085106383

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13385 Laminin_G_3 3.41e-29 682 836 1 151
Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
pfam14200 RicinB_lectin_2 1.45e-13 437 521 4 88
Ricin-type beta-trefoil lectin domain-like.
pfam00652 Ricin_B_lectin 2.41e-08 455 539 4 88
Ricin-type beta-trefoil lectin domain.
pfam14200 RicinB_lectin_2 1.00e-07 398 481 7 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.24e-07 487 539 1 58
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ60208.1 0.0 2 934 13 940
QUT88791.1 0.0 3 934 14 940
ASB47762.1 1.53e-281 27 918 34 917
APZ45922.1 1.31e-231 27 934 26 930
AUC19784.1 1.31e-231 27 934 26 930

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4QVS_A 1.42e-20 643 845 7 226
ChainA, S-layer domain-containing protein [Acetivibrio thermocellus ATCC 27405]
5HON_A 1.61e-06 641 839 5 205
Structureof Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus],5HON_B Structure of Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose [Geobacillus stearothermophilus]
5HO0_A 4.65e-06 622 839 608 844
Crystalstructure of AbnA (closed conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HO2_A Crystal structure of AbnA (open conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HOF_A Crystal structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinopentaose [Geobacillus stearothermophilus],5HP6_A Structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus (a new conformational state) [Geobacillus stearothermophilus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000878 0.997671 0.000628 0.000308 0.000260 0.000233

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002540_00177.