CAZyme Information: MGYG000002540_01329

Basic Information

• Species: Paraprevotella clara
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella clara
• CAZyme ID: MGYG000002540_01329
• CAZy Family: CBM13
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1025	MGYG000002540_22|CGC2	116595.73	7.4196

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002540	4187245	Isolate	not provided	not provided

• Gene Location: Start: 57760; End: 60837 Strand: -

Full Sequence      

MKCRTSAVKRLCVWLGCLLVMCPVLSRNFIHPGVLHTKERMKQIRALVKEKNEDAYASYL
LLEKHPCAQADYKMEGPFDTISRDGKFAYTKSKMERDFSAVYLNALMWGITGNEAHARKS
AEVLAAYARVLKRIPNTNDAPLLAGLEGFKIVYALELLKHTWRKMPEDDYKDALRMFTKI
FLPVLDTFYDRNPYTNGNWGTIVTKTYMAAAIHLDDRNMYEKARAFYLDGRDNGTLAHYI
DGETGQIQESGRDQSHCMLGIGAMATVCELAWQQGDDLYSAKNNRLLKGYEYVARYNLGY
DVPFVKWTDITGKYCDWNEVSDKARGRYMYVFEIAYNHYVNRMGLPMPFTKQVLEQLRPE
GYDRDQPGFGTLLFNEGAVGRKFVHPGGLHTLADLERMKMMVAQGQHPWAESWVELQKDP
WAQSTFEPRPMMNMGNSRQKASADAHAAYLNAIRWYVSGDEAYARCAVNICNAWSETVNQ
IPKARQDQGLLGIPISEFAMAAEVLRVCPLWKKDDFERFKDMMVEYLYPVSHEFLQTHGG
GNVDYCWTNWDACNMVALVAIGVLCDRPDIYREGIEYFKHGLGNGSIGNAVPYLHRMEDG
TVLGQWQESGRDQEHAMLGVGFLGTFCQIAWNQGDGLFAYDHNRLLAGAEYVARHNQMRG
VPFTYYNNSQGLNNRWPSINGLGRLEDRPVWEMIYNHYEVLKGIPAPYSKRMAELLRPEH
GSKDHFGYGSLTFSLRPSNYPLLPTPEVPVGLRTEISIGQIRVDWEPSAGYFANGYIVQR
SEAGRSEFKDIAVYKEKVTNWFIDTHIEAGKTYEYRVAAVNKTGTSRFSECVRATAISEG
EWPQEWAYGEIGDVVGGKVAYADVQEGTFRLECREGFMGNGVENTPFIYRKIKGDFSFSC
RVNAIKGYVSECGLMAKETLAGGGNAVTMTLGHFGRRFARMGWSVKGEKKRHFAIGNTYT
WVPAWFKLVRVGRVFYAYESTDGVNWFYVHSTRMDMPVEIYVGMIGSFREGKGGNYVVLD
HISID

Enzyme Prediction     

No EC number prediction in MGYG000002540_01329.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam05426	Alginate_lyase	7.26e-19	438	655	51	267	Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
pfam05426	Alginate_lyase	3.25e-16	64	296	15	267	Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
cd00063	FN3	2.68e-11	746	835	1	92	Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
smart00060	FN3	1.40e-08	746	826	1	83	Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
COG3401	FN3	0.001	746	836	257	343	Fibronectin type 3 domain [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AXP82777.1	5.54e-206	381	1024	36	676
QUT56879.1	4.14e-158	26	384	27	385
QQY39805.1	1.59e-157	26	384	27	385
ABR37862.1	1.59e-157	26	384	27	385
AXP82778.1	2.09e-141	378	1024	24	675

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000246	0.999186	0.000151	0.000143	0.000133	0.000128

TMHMM  Annotations     

start	end
13	35