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CAZyme Information: MGYG000002540_01581

You are here: Home > Sequence: MGYG000002540_01581

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paraprevotella clara
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella clara
CAZyme ID MGYG000002540_01581
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
757 MGYG000002540_22|CGC9 86539.61 7.2576
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002540 4187245 Isolate not provided not provided
Gene Location Start: 385991;  End: 388264  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002540_01581.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 370 480 2.8e-16 0.8043478260869565

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 3.04e-14 365 543 8 183
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16332 DUF4962 1.43e-07 23 331 172 451
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHM63024.1 1.41e-22 77 715 406 1010
ANX13982.1 3.98e-20 69 571 103 574
QUG40668.1 2.39e-19 73 638 110 633
AEJ62007.1 4.13e-19 73 529 61 527
AVR95980.1 8.74e-19 197 544 295 630

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2FUQ_A 9.61e-08 14 440 13 430
ChainA, heparinase II protein [Pedobacter heparinus],2FUQ_B Chain B, heparinase II protein [Pedobacter heparinus]
3E80_A 9.62e-08 14 440 15 432
Structureof Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_B Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_C Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus]
3E7J_A 3.79e-07 14 440 15 432
ChainA, Heparinase II protein [Pedobacter heparinus],3E7J_B Chain B, Heparinase II protein [Pedobacter heparinus]
7BJT_A 3.79e-07 11 463 15 502
ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BJT_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans]
7BM6_A 1.49e-06 11 463 15 502
ChainA, Alginate lyase, family PL17 [Zobellia galactanivorans],7BM6_B Chain B, Alginate lyase, family PL17 [Zobellia galactanivorans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C6XZB6 5.34e-07 14 440 38 455
Heparin and heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.709973 0.246442 0.042522 0.000324 0.000246 0.000484

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002540_01581.