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CAZyme Information: MGYG000002541_00501
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Cardiobacterium valvarum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium; Cardiobacterium valvarum | |||||||||||
| CAZyme ID | MGYG000002541_00501 | |||||||||||
| CAZy Family | GH103 | |||||||||||
| CAZyme Description | Membrane-bound lytic murein transglycosylase B | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3931; End: 5187 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH103 | 49 | 339 | 5.5e-108 | 0.9932203389830508 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam13406 | SLT_2 | 6.19e-126 | 70 | 337 | 23 | 292 | Transglycosylase SLT domain. This family is related to the SLT domain pfam01464. |
| TIGR02283 | MltB_2 | 4.85e-111 | 82 | 341 | 36 | 300 | lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan] |
| COG2951 | MltB | 3.78e-98 | 1 | 346 | 1 | 342 | Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis]. |
| PRK10760 | PRK10760 | 1.85e-34 | 100 | 340 | 115 | 354 | murein hydrolase B; Provisional |
| cd13399 | Slt35-like | 6.10e-22 | 132 | 260 | 2 | 87 | Slt35-like lytic transglycosylase. Lytic transglycosylase similar to Escherichia coli lytic transglycosylase Slt35 and Pseudomonas aeruginosa Sltb1. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VEG78199.1 | 7.36e-231 | 5 | 415 | 3 | 412 |
| ABQ13121.1 | 1.31e-143 | 2 | 415 | 6 | 415 |
| AXM45866.1 | 1.31e-143 | 2 | 415 | 6 | 415 |
| AMN67810.1 | 1.40e-137 | 48 | 414 | 68 | 432 |
| AMN49956.1 | 1.98e-137 | 48 | 414 | 68 | 432 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5AO8_A | 3.19e-107 | 44 | 405 | 42 | 408 | CrystalStructure of SltB3 from Pseudomonas aeruginosa in complex with NAG-NAM-pentapeptide [Pseudomonas aeruginosa] |
| 5ANZ_A | 1.27e-106 | 44 | 405 | 42 | 408 | CrystalStructure of SltB3 from Pseudomonas aeruginosa. [Pseudomonas aeruginosa],5AO7_A Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-anhNAM-pentapeptide [Pseudomonas aeruginosa] |
| 5O8X_A | 5.85e-25 | 64 | 340 | 20 | 300 | TheX-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa],5O8X_B The X-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa] |
| 4ANR_A | 7.81e-25 | 64 | 340 | 37 | 317 | Crystalstructure of soluble lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1] |
| 1LTM_A | 9.25e-24 | 100 | 340 | 76 | 315 | AcceleratedX-ray Structure Elucidation Of A 36 Kda Muramidase/transglycosylase Using Warp [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P41052 | 9.18e-23 | 100 | 340 | 117 | 356 | Membrane-bound lytic murein transglycosylase B OS=Escherichia coli (strain K12) OX=83333 GN=mltB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000000 | 1.000047 | 0.000000 | 0.000000 | 0.000000 |