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CAZyme Information: MGYG000002541_01647

You are here: Home > Sequence: MGYG000002541_01647

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cardiobacterium valvarum
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium; Cardiobacterium valvarum
CAZyme ID MGYG000002541_01647
CAZy Family GH103
CAZyme Description Membrane-bound lytic murein transglycosylase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
337 MGYG000002541_114|CGC2 37670.65 6.2439
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002541 2547857 Isolate not provided not provided
Gene Location Start: 35131;  End: 36144  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002541_01647.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH103 33 328 3.9e-89 0.976271186440678

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13406 SLT_2 1.38e-116 35 326 9 292
Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.
TIGR02282 MltB 3.11e-102 37 328 6 290
lytic murein transglycosylase B. This family consists of lytic murein transglycosylases (murein hydrolases) in the family of MltB, which is a membrane-bound lipoprotein in Escherichia coli. The N-terminal lipoprotein modification motif is conserved in about half the members of this family. The term Slt35 describes a naturally occurring soluble fragment of MltB. Members of this family never contain the putative peptidoglycan binding domain described by pfam01471, which is associated with several classes of bacterial cell wall lytic enzymes. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
PRK10760 PRK10760 4.50e-84 6 332 12 357
murein hydrolase B; Provisional
COG2951 MltB 3.50e-83 1 332 15 339
Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis].
TIGR02283 MltB_2 1.90e-61 34 330 9 300
lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEG76992.1 1.46e-204 5 337 4 334
ABQ13340.1 9.84e-121 24 331 26 332
AXM45748.1 9.84e-121 24 331 26 332
SDT88729.1 2.78e-78 25 328 33 330
QNH07558.1 4.86e-76 15 326 23 327

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5O8X_A 3.30e-70 25 332 2 303
TheX-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa],5O8X_B The X-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa]
4ANR_A 2.17e-69 28 332 22 320
Crystalstructure of soluble lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
1LTM_A 4.14e-59 25 328 13 314
AcceleratedX-ray Structure Elucidation Of A 36 Kda Muramidase/transglycosylase Using Warp [Escherichia coli]
1D0K_A 4.38e-59 25 328 15 316
ChainA, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1D0L_A Chain A, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1D0M_A Chain A, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE [Escherichia coli],1QDR_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QDT_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QUS_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli],1QUT_A Chain A, LYTIC MUREIN TRANSGLYCOSYLASE B [Escherichia coli]
5ANZ_A 3.38e-31 36 326 56 341
CrystalStructure of SltB3 from Pseudomonas aeruginosa. [Pseudomonas aeruginosa],5AO7_A Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-anhNAM-pentapeptide [Pseudomonas aeruginosa]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P41052 6.87e-58 25 328 54 355
Membrane-bound lytic murein transglycosylase B OS=Escherichia coli (strain K12) OX=83333 GN=mltB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000781 0.681209 0.316971 0.000347 0.000375 0.000299

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002541_01647.