CAZyme Information: MGYG000002542_01737

Basic Information

• Species: Lentilactobacillus parafarraginis
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus; Lentilactobacillus parafarraginis
• CAZyme ID: MGYG000002542_01737
• CAZy Family: GH146
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
724	MGYG000002542_116|CGC1	83636.01	4.8231

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002542	2852137	Isolate	not provided	not provided

• Gene Location: Start: 22846; End: 25020 Strand: +

Full Sequence      

MKPVSYYNVEYLPNSTLKEKFERNINWMLSLTPDQLLYNYRKNAGLDTKGATPLTVWESP
DFFFRGHFTGHYLSGASKTFVELTNTDEKDPQAVELKNRVDLIVTGLKEVQDKLSETSEF
PGYLAAEPEKRFDNLEKLRFNGNHYVPYYAIQKLMDGLMDAYQYTGNQTALQLVKNLTSY
VEKRMAKLTPERISAMLDTRWYQGSGQYIFHQEFGAMHRTLLRLYELTGKKEQDVFDLAE
KFDRKWFRDMLINNEDKLGYYSMHSNTELVCAEGMLEYYHVTGDDQYKKGVENYMDWMHT
GHELPTKGISGRSAYPAPADYGSELYDYPEMFFKHLSKLNGESCCSHDLNYLSSELFADT
KDPVLMNDYEIRFINAIMAQQNNDSAIAEYLYNLSVAPNSVKHYDRGGFWCCVGSGTERH
STLVDGIYYQDNDDIYVAQYFDSILNLKDQGVKVTQDAHYPDQHFAHITVETEQPKDFTI
YVRVPKWSAETTITVDGKAVKVQPENGFVAIKRNWSKKSEITINFDFQLRYQVLADRFNR
IAIYYGPILLAAQKADLPASTVSAKEYLNDLEKVEGKNQFRLKGSDIIFKSLPEIPGETP
YNVFVKVPEEPVAKTIDTQNDGAQFGHQWTLAVDPDKKNYLKITYSALDDDIYSFQIEDD
DQVLFTQTMTKEEWPEDSYYIYPLPQSVTKGRDKLNIKIEPLDYESLNFDVADIDKIETM
VATK

Enzyme Prediction     

No EC number prediction in MGYG000002542_01737.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH146	13	551	8.9e-129	0.9900596421471173

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	8.44e-103	8	551	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	1.33e-62	1	584	3	532	Uncharacterized conserved protein, DUF1680 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGV24839.1	0.0	1	724	1	726
QPI45544.1	0.0	1	720	1	720
ASB48773.1	5.57e-87	12	607	46	615
QSB26316.1	4.24e-84	2	610	29	615
QSW89191.1	3.79e-82	12	553	1	518

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YQH_AAA	2.75e-50	4	551	25	560	ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A	5.15e-47	4	551	25	560	Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
4QJY_A	3.11e-15	123	611	123	618	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	7.13e-15	33	611	51	618	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
6EX6_A	1.50e-13	148	556	142	550	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000065	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002542_01737.