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CAZyme Information: MGYG000002548_00136

You are here: Home > Sequence: MGYG000002548_00136

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus argenteus
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus argenteus
CAZyme ID MGYG000002548_00136
CAZy Family GH73
CAZyme Description Bifunctional autolysin
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
258 MGYG000002548_1|CGC3 29810.23 9.7607
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002548 2783391 Isolate China Asia
Gene Location Start: 122749;  End: 123525  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002548_00136.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 115 240 2.2e-25 0.953125

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.08e-119 14 258 1 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 7.26e-33 103 245 2 146
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 5.41e-10 114 190 1 74
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG1705 FlgJ 1.93e-04 119 239 53 177
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBN31395.1 9.06e-185 1 258 1 258
API80217.1 9.06e-185 1 258 1 258
CCE59959.1 9.06e-185 1 258 1 258
VEE66756.1 7.67e-177 1 258 1 258
BBD86987.1 1.32e-176 15 258 1 244

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4PI7_A 2.79e-155 35 258 5 228
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 2.29e-154 35 258 5 228
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6FXO_A 1.37e-49 35 246 8 232
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
6FXP_A 3.82e-42 66 258 49 246
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 4.10e-42 66 258 79 276
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8CPQ1 9.16e-50 27 246 1086 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q5HQB9 9.16e-50 27 246 1086 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
O33635 9.16e-50 27 246 1086 1323
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q6GI31 3.21e-45 35 246 1021 1245
Bifunctional autolysin OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=atl PE=3 SV=1
Q6GAG0 5.93e-45 27 246 1001 1238
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.936804 0.051944 0.002017 0.000215 0.000136 0.008901

TMHMM  Annotations      download full data without filtering help

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