logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002548_00683

You are here: Home > Sequence: MGYG000002548_00683

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus argenteus
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus argenteus
CAZyme ID MGYG000002548_00683
CAZy Family GT0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
360 MGYG000002548_5|CGC1 42357.46 9.7213
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002548 2783391 Isolate China Asia
Gene Location Start: 19318;  End: 20400  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002548_00683.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03794 GT4_WbuB-like 1.35e-14 30 353 32 379
Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
COG0438 RfaB 1.99e-05 2 354 1 377
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis].
cd03811 GT4_GT28_WabH-like 3.16e-04 18 352 18 351
family 4 and family 28 glycosyltransferases similar to Klebsiella WabH. This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBD84978.1 9.17e-266 1 360 2 361
QDZ03790.1 1.41e-264 2 360 1 359
QJS20619.1 1.48e-218 2 360 1 359
AWZ64397.1 1.48e-218 2 360 1 359
QJS23268.1 1.48e-218 2 360 1 359

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000039 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002548_00683.