CAZyme Information: MGYG000002548_02180

Basic Information

• Species: Staphylococcus argenteus
• Lineage: Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus argenteus
• CAZyme ID: MGYG000002548_02180
• CAZy Family: GH73
• CAZyme Description: N-acetylmuramoyl-L-alanine amidase domain-containing protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
624	MGYG000002548_29|CGC1	69607.51	6.2922

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002548	2783391	Isolate	China	Asia

• Gene Location: Start: 10364; End: 12238 Strand: +

Full Sequence      

MPKNKILIYLLSTTLVLPTLVSPNAYADTPKNDTTAKTTTTHGSKKSNDVETSKDSTSKN
TDADKAEAKQEDNDNTSKHDTNDSKNKTLDDRRSNSDNILDFIYKNLPQSDFNQLFNKNK
YDDNFSLTTLIQNLFNLNSDISDYEQPRNDKNTSDDSNKNSDKSTQNEPASKSSKQDKVD
NQKAPTTTDGKPSTSNKQADSQKPNQSNDKPTNDNNANHKSSSKNDQSMSDSALDSILDQ
YSEDAKKTQKDYASQSKKDKDAKSKTSNPQLPSKDELKHKSKPAQSFNNDVNKNDTRATS
LFETDPSASNNSDTGQFNVVDSKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDS
GRSALAKSPNHNLFGIKGAFEGNSVSFNTLEADGNQLYSINAGFRKYPSTKESLKDYSNL
IKKGIDGNADIYKPTWKSEADSYKDATAHLSKTYATDPNYAKKLNSIIKHYQLSQFDDER
MPDLDKYERSINDDDSSSDGFKPFREVSDNMPYPHGQCTWYVYNRMKQFGSSISGDLGDA
HNWNNRAEYRDYHVSHTPKRHSAVVFEAGQFGADQQYGHVAFVEKVNRDGSIVISESNVK
GLGIISYRTINAEAAEELSYITGK

Enzyme Prediction     

No EC number prediction in MGYG000002548_02180.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH73	333	473	3.5e-29	0.984375

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK08581	PRK08581	0.0	1	624	1	619	amidase domain-containing protein.
COG1705	FlgJ	2.01e-60	309	490	30	201	Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
PRK06347	PRK06347	1.55e-42	239	477	59	303	1,4-beta-N-acetylmuramoylhydrolase.
COG3942	COG3942	6.15e-38	507	624	62	173	Surface antigen [Cell wall/membrane/envelope biogenesis].
smart00047	LYZ2	1.21e-32	322	477	5	147	Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBD87331.1	0.0	1	624	4	627
ATZ88306.1	0.0	1	624	1	624
BBN31053.1	0.0	1	624	1	624
ATY58082.1	0.0	1	624	1	624
CCE60295.1	0.0	1	624	1	624

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5T1Q_A	3.56e-236	266	624	1	359	ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325]
3FI7_A	1.57e-40	328	477	33	183	CrystalStructure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain [Listeria monocytogenes EGD-e]
2LRJ_A	7.14e-18	513	621	11	111	ChainA, Staphyloxanthin biosynthesis protein, putative [Staphylococcus aureus subsp. aureus COL]
2K3A_A	4.02e-17	513	621	52	152	ChainA, CHAP domain protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]
5DN5_A	8.77e-13	324	469	2	146	Structureof a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_B Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],5DN5_C Structure of a C-terminally truncated glycoside hydrolase domain from Salmonella typhimurium FlgJ [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q2G222	1.01e-281	1	624	1	619	N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_02979 PE=1 SV=1
P39046	8.08e-35	325	477	62	214	Muramidase-2 OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=EHR_05900 PE=1 SV=1
P37710	1.65e-32	327	477	182	333	Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
Q9CIT4	3.60e-32	325	477	62	214	Probable N-acetylmuramidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=acmA PE=3 SV=1
A2RHZ5	8.73e-32	328	477	65	214	Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=acmA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000303	0.998970	0.000185	0.000194	0.000177	0.000149

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002548_02180.