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CAZyme Information: MGYG000002552_00924
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira sp000436535 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp000436535 | |||||||||||
| CAZyme ID | MGYG000002552_00924 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 112178; End: 120829 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 1284 | 1567 | 3.4e-76 | 0.9583333333333334 |
| PL1 | 1717 | 1952 | 4.1e-41 | 0.7920792079207921 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 3.58e-39 | 1266 | 1562 | 81 | 395 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02432 | PLN02432 | 1.48e-35 | 1270 | 1562 | 15 | 275 | putative pectinesterase |
| PLN02773 | PLN02773 | 2.29e-35 | 1288 | 1545 | 17 | 269 | pectinesterase |
| pfam01095 | Pectinesterase | 7.94e-33 | 1287 | 1545 | 11 | 265 | Pectinesterase. |
| PLN02682 | PLN02682 | 3.05e-32 | 1280 | 1545 | 74 | 334 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADD62022.1 | 0.0 | 26 | 2097 | 1 | 2073 |
| QEH70392.1 | 0.0 | 769 | 2088 | 489 | 1786 |
| ACZ98653.1 | 0.0 | 691 | 2064 | 3 | 1359 |
| ACR72234.1 | 7.48e-133 | 787 | 1580 | 278 | 1077 |
| CED92996.1 | 5.36e-80 | 1016 | 1560 | 436 | 995 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5GT5_A | 3.92e-68 | 1619 | 2053 | 7 | 446 | Structuralbasis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602],5GT5_B Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602] |
| 2NSP_A | 5.25e-30 | 1264 | 1573 | 2 | 339 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 3UW0_A | 2.46e-27 | 1266 | 1556 | 31 | 345 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 2NTB_A | 4.41e-26 | 1264 | 1573 | 2 | 339 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 1QJV_A | 4.41e-26 | 1264 | 1573 | 2 | 339 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| D3JTC2 | 2.10e-65 | 1619 | 1950 | 36 | 366 | Pectate lyase B OS=Paenibacillus amylolyticus OX=1451 GN=pelB PE=1 SV=1 |
| P0C1A9 | 3.75e-25 | 1264 | 1573 | 26 | 363 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| Q9FM79 | 4.77e-25 | 1238 | 1515 | 50 | 317 | Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1 |
| P0C1A8 | 5.06e-25 | 1264 | 1573 | 26 | 363 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
| Q9LVQ0 | 1.00e-23 | 1284 | 1545 | 13 | 269 | Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001830 | 0.997131 | 0.000411 | 0.000279 | 0.000182 | 0.000170 |
