logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002558_02445

You are here: Home > Sequence: MGYG000002558_02445

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900540415
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900540415
CAZyme ID MGYG000002558_02445
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
471 MGYG000002558_105|CGC1 53319.76 7.6254
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002558 3471678 MAG China Asia
Gene Location Start: 11;  End: 1426  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 83 450 2.7e-69 0.9353846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.41e-85 29 454 67 499
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 6.75e-15 37 340 10 258
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 3.71e-10 214 341 85 207
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 4.16e-09 53 452 69 420
polygalacturonase ADPG
PLN03010 PLN03010 1.45e-08 217 405 160 339
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT27372.1 1.23e-207 21 460 19 453
QDH57575.1 3.74e-207 21 460 11 445
QRN02097.1 2.15e-206 21 460 11 445
QUT32903.1 2.86e-206 21 460 19 453
CBK68228.1 2.86e-206 21 460 19 453

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 1.25e-199 27 460 20 446
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 7.75e-88 48 440 24 411
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 1.93e-20 217 381 25 193
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
Q9LW07 9.54e-17 50 469 22 387
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
Q02096 2.13e-10 48 292 81 286
Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1
Q7M1E7 6.56e-08 52 322 59 282
Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1
P43212 3.30e-06 50 322 57 282
Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.051200 0.544651 0.402569 0.000725 0.000376 0.000452

TMHMM  Annotations      download full data without filtering help

start end
7 26