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CAZyme Information: MGYG000002559_01573

You are here: Home > Sequence: MGYG000002559_01573

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira sp900551945
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900551945
CAZyme ID MGYG000002559_01573
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
483 MGYG000002559_71|CGC1 50469.12 6.2276
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002559 2652289 MAG China Asia
Gene Location Start: 9414;  End: 10865  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002559_01573.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 171 455 3.6e-73 0.7406417112299465

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 3.66e-04 221 379 1 153
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACR72725.1 1.48e-147 185 483 1 299
ADL35876.1 2.48e-145 182 483 209 510
ACZ98652.1 7.37e-126 184 479 34 329
ADU21671.1 8.78e-125 186 483 228 525
CDM69960.1 1.20e-116 184 483 250 550

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLQ_A 1.64e-13 295 448 166 334
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 4.95e-16 203 479 92 355
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P22751 9.87e-10 297 437 517 644
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000320 0.998942 0.000231 0.000174 0.000160 0.000151

TMHMM  Annotations      download full data without filtering help

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