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CAZyme Information: MGYG000002560_03004

You are here: Home > Sequence: MGYG000002560_03004

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp902388365
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp902388365
CAZyme ID MGYG000002560_03004
CAZy Family GH138
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
901 MGYG000002560_21|CGC1 101585.72 6.2225
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002560 5390440 MAG China Asia
Gene Location Start: 45715;  End: 48420  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH138 4 901 0 0.9988974641675854

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02838 Glyco_hydro_20b 3.83e-06 24 129 21 118
Glycosyl hydrolase family 20, domain 2. This domain has a zincin-like fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT83710.1 0.0 1 901 1 901
AII62823.1 0.0 1 901 1 901
AII68811.1 0.0 1 901 1 901
QUT58535.1 0.0 1 901 1 901
AND20296.1 0.0 4 901 1 898

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6HZE_A 0.0 4 901 1 893
ChainA, BPa0997 [Phocaeicola paurosaccharolyticus],6HZE_B Chain B, BPa0997 [Phocaeicola paurosaccharolyticus],6HZG_A Chain A, BPa0997 N-ter E361S [Phocaeicola paurosaccharolyticus]
6HZF_A 0.0 19 901 16 893
ChainA, BPa0997 [Phocaeicola paurosaccharolyticus]
6HZF_B 0.0 27 901 2 871
ChainB, BPa0997 [Phocaeicola paurosaccharolyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000044 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002560_03004.