CAZyme Information: MGYG000002561_00026

Basic Information

• Species: Bacteroides sp902388495
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902388495
• CAZyme ID: MGYG000002561_00026
• CAZy Family: GH55
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
991	MGYG000002561_1|CGC1	112142.84	6.1115

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002561	4554549	MAG	China	Asia

• Gene Location: Start: 46936; End: 49911 Strand: +

Full Sequence      

MLWTAICVASSAVTSRSVFTQRPDDPDAVYFNPTKGDVTSALQQAINALKKRDNYGIVYL
APGEYRISGTIYVPPSIRLIGYGKERPVVILSKNSPGFDQSYPDDEGDAKYMFWFISNTA
DEEVEPAEATSGTFFQGFENINVKVENGNPQAVVFRTHYAQHSFIEHVEMQIGNGKAGIF
EAGNEIEDVVFCGGDYGIYTRKTSPGWQVTILNTLFEGQRKACIRTMEAGMTLVRVTMRH
SPIGLEIWPGYTDVAFMEDCTLENLSEAGVMQSGVLTPTNQFNALNVTCRRVPCFLKFRE
GDQRKVENKSAIYCVDSLSLGLTFDSMESDGNHALRYNLRPLTQMPTPPRNDIPTLPDMS
QWTNIMDLGAVGDDKTDNTEVFLKAIEEHDVIYLPQGIYRVSKPIKFKPNTVMIGMDPVS
TRIKLAAHSPAFSGFGEPVPLIETPMGGRCILSGIGLDAMGFNYRAVTCKWMAGEESYMN
DVHFSGWATVKGPQRFPGFTQEMSNSMMRPRIMDRGVEESWDNQHWNLWVTRQGGGVFKN
IWINNTYGSCGLFVENTSTPGRIYEMSVEHHLRSEVRFSNASKWRIYALQLEEETREGND
VVPMELTGCNDLRFFNFFVFRVISIVRPLPYAVRIWNSSDIHFYNFHNFTQMRFTINNSV
YDPNKRIAVRPWEFARLTITGKEAQRPERPCEDNVECLQSGFEYAEGIVHDNNGNVFFSE
ERLRKVYMWNAATKKLSLLLDLPWQPLSLATDTENRLLVMVKYYPQPKPRPSNASGSGAG
GAWSTLPKPDQLPDHKGTTYSWWGNFGFEPMVYCVDTSNPNATIQTLPLSKELPVAGKVE
KIYYATHRWRDLHDFDSVCIYRPKEYFVAPDGCTVIPRQYDLLRSSSLQSVVPGSTIYQV
DEFAHRVKRFKVDAQGFLSEPELFAERGEHGVTTDRNGNVYIAEGNILVYNSKGDYQRTI
HTPEGPNSLTCSGDYLYFTTRNSFCRVKIAN

Enzyme Prediction     

No EC number prediction in MGYG000002561_00026.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	34	647	1.4e-74	0.8364864864864865

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam12708	Pectate_lyase_3	1.07e-12	37	218	16	185	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708	Pectate_lyase_3	2.29e-11	362	436	1	78	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
cd14963	NHL_like_5	9.22e-06	892	989	17	126	Uncharacterized NHL-repeat domain in bacterial proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.
cd05819	NHL	7.81e-05	896	989	67	174	NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.
cd14957	NHL_like_2	1.17e-04	890	969	165	251	Uncharacterized NHL-repeat domain in bacterial and archaeal proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AHW60618.1	2.64e-307	12	988	19	991
QEM14394.1	1.88e-303	16	989	21	986
AYL99405.1	6.81e-301	6	989	10	996
QMI79027.1	4.08e-296	6	989	15	1003
QUU00135.1	9.60e-295	12	989	22	1004

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.678917	0.320009	0.000422	0.000275	0.000176	0.000209

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002561_00026.