CAZyme Information: MGYG000002561_01470

Basic Information

• Species: Bacteroides sp902388495
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp902388495
• CAZyme ID: MGYG000002561_01470
• CAZy Family: GH127
• CAZyme Description: Non-reducing end beta-L-arabinofuranosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
680	MGYG000002561_8|CGC1	75847.8	6.7068

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002561	4554549	MAG	China	Asia

• Gene Location: Start: 78529; End: 80571 Strand: +

Full Sequence      

MNPNNTIGTMKRLLTLALTAALAGSTVAQKQQSLHSGYPITPVPFTSVKVTDGFWGQRLR
ASREVTIPLAFSKCEETGRYENFVKAAHPSEEYKVEGFSFDDTDVYKTIEGASYSLQTYP
DKKLERYIDSVLTIVAAAQEPDGYLYTARTMNPKHPHNWAGPERWVAVEHLSHEFYNLGH
MVEGAVAHYQATGKRNFLDIAIRYADCVCKAIGDGPDQKRLVPGHQIAEMALAKLYLVTG
DKKYLDQAKFFLDARGTTSRKDAYSQAHLPVVEQDEAVGHAVRATYMYSGMADVAAITGD
SSYIKAIDRIWDNIVSKKIYITGGIGARHDGEAFGDNYELPNLSAYNETCAAIGNVYMNY
RLFLLHGDAKYFDVLERTLYNGLISGVSLDGGSFFYPNPLASDGGYSRQPWFGCACCPSN
ISRFIPSLPGYAYAVKDEQVYVNLFLSNRAELNVNKKKVVLEQETSYPWNGDIRLTVAQG
NQPFTMNIRIPGWVRGSVLPGDLYAYADNQKPTYRVLVNGQEVRGELTNGYLGIDRRWKK
GDVVEIHFDMLPRVVKANPKVEADRGRVAIERGPLVYCAEWPDNDFNVHTVLLNRNPQFR
VVEKPELLYGVSEITTDAQAISYDATGRLAVKDVTLTLIPYYAWAHRGEGNMDVWLPVDI
SAASALPQKGEKQADNGFFK

Enzyme Prediction     

No EC number prediction in MGYG000002561_01470.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	48	578	4.5e-209	0.9980916030534351

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3533	COG3533	0.0	39	656	2	585	Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam07944	Glyco_hydro_127	0.0	47	578	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
cd04791	LanC_SerThrkinase	2.84e-04	189	310	99	230	Lanthionine synthetase C-like domain associated with serine/threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
COG1331	YyaL	7.77e-04	231	379	419	564	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only].
COG1331	YyaL	0.002	179	310	414	563	Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QPH58081.1	0.0	10	669	1	668
QBJ17728.1	0.0	10	669	1	668
QMI79221.1	0.0	10	669	1	668
QQA08209.1	0.0	10	680	1	667
QMW86046.1	0.0	10	680	1	667

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6EX6_A	0.0	34	680	1	647	TheGH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482],6EX6_B The GH127, Beta-arabinofuranosidase, BT3674 [Bacteroides thetaiotaomicron VPI-5482]
4QJY_A	1.82e-144	46	656	14	645	Crystalstructure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QJY_B Crystal structure of native Ara127N, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
4QK0_A	2.20e-139	46	656	14	645	Crystalstructure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_B Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_C Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus],4QK0_D Crystal structure of Ara127N-Se, a GH127 beta-L-arabinofuranosidase from Geobacillus Stearothermophilus T6 [Geobacillus stearothermophilus]
5MQO_A	1.42e-110	13	658	10	696	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]
3WRE_A	1.14e-108	97	655	70	655	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH8	6.23e-108	97	655	70	655	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000714	0.997967	0.000687	0.000226	0.000212	0.000168

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002561_01470.