logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002563_00625

You are here: Home > Sequence: MGYG000002563_00625

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Romboutsia timonensis
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia timonensis
CAZyme ID MGYG000002563_00625
CAZy Family GT32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
237 MGYG000002563_10|CGC1 28221.1 8.1781
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002563 2922672 MAG China Asia
Gene Location Start: 25495;  End: 26208  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002563_00625.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT32 21 98 1.3e-23 0.9555555555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3774 OCH1 1.52e-21 2 129 81 212
Mannosyltransferase OCH1 or related enzyme [Cell wall/membrane/envelope biogenesis].
pfam04488 Gly_transf_sug 5.31e-14 18 101 1 92
Glycosyltransferase sugar-binding region containing DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases.
pfam05704 Caps_synth 9.40e-10 4 131 44 188
Capsular polysaccharide synthesis protein. This family consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae.
pfam12919 TcdA_TcdB 3.02e-04 43 87 146 195
TcdA/TcdB catalytic glycosyltransferase domain. This domain represents the N-terminal glycosyltransferase from a set of toxins found in some bacteria. This domain in TcdB glycosylates the host RhoA protein.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CED94668.1 5.46e-171 1 237 1 237
QYE97619.1 3.81e-141 1 235 1 235
AUN15518.1 3.13e-140 1 235 1 235
QPG03656.1 5.35e-115 3 228 2 227
QAR34957.1 1.08e-114 3 228 2 227

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q10323 2.81e-10 2 124 56 181
Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17G8.11c PE=1 SV=1
Q9UT67 1.37e-08 2 125 81 207
Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC4F11.04c PE=3 SV=1
P38287 2.14e-07 3 144 62 201
Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CSH1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002563_00625.