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CAZyme Information: MGYG000002563_01604

You are here: Home > Sequence: MGYG000002563_01604

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Romboutsia timonensis
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia timonensis
CAZyme ID MGYG000002563_01604
CAZy Family GT32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
246 MGYG000002563_38|CGC1 29072.92 7.2336
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002563 2922672 MAG China Asia
Gene Location Start: 10832;  End: 11572  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002563_01604.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT32 25 102 3e-24 0.9555555555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3774 OCH1 3.12e-19 7 239 82 308
Mannosyltransferase OCH1 or related enzyme [Cell wall/membrane/envelope biogenesis].
pfam05704 Caps_synth 1.71e-15 2 136 41 189
Capsular polysaccharide synthesis protein. This family consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae.
pfam04488 Gly_transf_sug 3.01e-15 22 106 1 93
Glycosyltransferase sugar-binding region containing DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases.
pfam12919 TcdA_TcdB 2.85e-04 52 89 156 193
TcdA/TcdB catalytic glycosyltransferase domain. This domain represents the N-terminal glycosyltransferase from a set of toxins found in some bacteria. This domain in TcdB glycosylates the host RhoA protein.
NF033479 Efa1_rel_toxin 0.008 18 90 433 508
LifA/Efa1-related large cytotoxin. Members of this family are large and almost certainly multifunctional proteins found in various pathogens from genus Chlamydia, about 3000 amino acids in size and related to lymphostatin (Efa1/LifA) from enteropathogenic Escherichia coli. Roles have been suggested for Efa1 (EHEC factor for adherence) in adhesion, so some members have been annotated as adherence proteins rather than cytotoxins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIK39696.1 3.40e-114 5 243 5 243
AJI15871.1 3.40e-114 5 243 5 243
QLC87091.1 5.02e-114 1 245 1 245
QWH94883.1 2.89e-113 5 245 5 245
QDZ80713.1 1.67e-112 1 245 1 245

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002563_01604.