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CAZyme Information: MGYG000002563_02101
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Romboutsia timonensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia timonensis | |||||||||||
| CAZyme ID | MGYG000002563_02101 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 5499; End: 7499 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH73 | 510 | 647 | 3.9e-23 | 0.9609375 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 2.22e-46 | 446 | 666 | 47 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| COG3103 | YgiM | 8.33e-19 | 102 | 238 | 27 | 168 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| COG3103 | YgiM | 5.97e-16 | 246 | 392 | 28 | 168 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| COG3103 | YgiM | 2.99e-15 | 169 | 308 | 29 | 157 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| COG3103 | YgiM | 8.96e-15 | 4 | 163 | 3 | 155 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CED94424.1 | 0.0 | 1 | 666 | 1 | 806 |
| CEI73566.1 | 4.34e-241 | 1 | 665 | 1 | 808 |
| AXU34918.1 | 2.67e-221 | 1 | 666 | 1 | 603 |
| AXU31130.1 | 2.67e-221 | 1 | 666 | 1 | 603 |
| AXU27329.1 | 2.67e-221 | 1 | 666 | 1 | 603 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5WQW_A | 1.61e-41 | 451 | 663 | 43 | 267 | X-raystructure of catalytic domain of autolysin from Clostridium perfringens [Clostridium perfringens str. 13] |
| 6FXO_A | 1.90e-26 | 454 | 666 | 44 | 244 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI7_A | 7.11e-25 | 479 | 646 | 60 | 209 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 4.49e-24 | 479 | 646 | 60 | 209 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 6FXP_A | 1.94e-21 | 440 | 666 | 39 | 241 | ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39848 | 5.82e-33 | 451 | 666 | 683 | 880 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| O32041 | 1.77e-31 | 102 | 385 | 32 | 331 | Putative N-acetylmuramoyl-L-alanine amidase YrvJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yrvJ PE=3 SV=1 |
| Q5HQB9 | 2.86e-27 | 459 | 666 | 1140 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| O33635 | 2.86e-27 | 459 | 666 | 1140 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q8CPQ1 | 5.02e-27 | 459 | 666 | 1140 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000695 | 0.997945 | 0.000320 | 0.000388 | 0.000333 | 0.000287 |