CAZyme Information: MGYG000002563_02259

Basic Information

• Species: Romboutsia timonensis
• Lineage: Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia timonensis
• CAZyme ID: MGYG000002563_02259
• CAZy Family: CBM51
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1918	MGYG000002563_82|CGC1	216516.56	4.6335

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002563	2922672	MAG	China	Asia

• Gene Location: Start: 856; End: 6612 Strand: -

Full Sequence      

MHKKKIAVMTMAIIISNFSAATLEVLADEVKNNSTAIEQNVIEEPNIATIKKFDLLNNKK
LEEYDKSFKLDNSKIIEVTNNGKHYWQYELSKATDGDLKTHWESGTYNSDDFTNEVVFKL
DEVTNLDRIVYGARQDGHKGLGFAKEFEIYTSLTNEGDDFKLVSTGSSDLSKEFVEIKFK
PTDFKRIKFVFKSTNTNGLEKGLPSASEFMFYKEDPVRERMNRLYTNDKKNKLSEEFMSS
QALEDLEVAAQSHPLYDDMKEDLENARILLESSKLEYVDANVSKFISVSDDVLNQYNEEF
KIKRENITSITTNGGQYSTNSVDRAIDGDPNTQWHSNNKNNSSFTNEVIITLDKLTTIDR
VTYLDKVSRGFAKSFDIYASKTTSGETFEKISSGSHSITTDTLEIKFKPTELRRIKLVFK
ETHEDWAVAYEIGLYKEDTVKDKIDRLFIDSNMSEVNAEFSTTAAIDNLIEEIKGHPLEN
EFKEKLDIAKELLEFGKIQSNSANIKKFNAFYSDNIDAYDERFRVPNSNIEKIENNGGHY
PNSQLKYAIDEDVNTHWETGNPNSSTFKNEVTLTLKEAQVINRLTYKSRNGCKGFANNFS
IYISPVSSGNNFQKVSEGSYTSTNDMLEISFNPTKAKRVKFVFDKANQDWASIGDLRLYK
QDETSEKMSRLFSNLVMDTVSEEFNDIKKLEELEKEVKGHPLYNLFKEDVEDAKNIVQGK
IENIKTVVAEQHGDRNAHNNKNLKFGFGNNNQPTGIVARPGETITVYVDVEEGKPLPQLM
FSQQEGSFANWGRTVSLYPGKNVITVPKVTQEDGWYHHSVTPGGPVYIVNPYTAEEQGKA
PVIRFAKGVEEFPTIDKNTNEVEFIKFLKEYKKRIDEDIEANPDVMDRKVIDTFELVADN
VVITGTVSGAYDAYVNQGFKPLDSLKMHNDHMNMLFEYQGIDGRNEKNDIKYTRENIRLA
QPYGYMYAAIGHIGVQRDVMSNILTNVGGWGIDHEIGHKMDIGVRTIGEVTNNMLPQQSS
YYYNKLNKRIPFESHVYKNVISTNSNKYADGELAENLAVFWQLEMIYPGYWAKLNSLYRE
NNVTLEEGNEYNDKLNKLAYYSSIALELDLTEYFERHGFWVSDETKEFAKRYNKPDKKIW
YANYDYIEYDGEGFTTEPTIKVTTSKEGENLKLNINIDKKSKSDLMGYEIYKNDELIAFT
STNSFVDTEANFDENVVYKVVAFDKRLNESKGYETNSYAPSIKLQQNEINIKLNEEFNPS
TLVRAYNYNGEEITSEIIINNGVNSSEKGIYQVEYVVTDEGITTKEMLTVNVVSDYDYLS
DSQWQSVQTQWGTPATNTNIQGKVNGTVNTFNKGISIHANGKVTYDLSGKDYDNFEALVG
VNYGSIGQNNNSSITFKVIGDGKTLATTNVIKYADDMVSINVPIKGVKTLEIEVNDGGNG
NTADHGLIANPKLTTNNAKPTLSVEETTLVKLNSEFNLMDGVVANDIEDGNLISKVQVES
DGFSINKSGKYNVVYSVTDNDGNTATKTRTVIVYSKYDYISDLDWESAESGWKTVNKDSA
VNTTSKIKLNIDGTIKEFDKGLGAAQNSEIVYNLDGEYTYFTTYVGTDKNYDHNSTSVKF
KIFADGEEVYTSDVMRKDSKADFVSLDVTGVKELKLVSDEAGNGGLGDFASWADTKVYSI
NSRPKLTIPASQIIKVGETLNLTEGVYAIDAEDGDITSNVVLSGDVNFNKAGRYNVTYTI
TDNDGNTVEKARTISVVNMEDYTYLSDIKWKSANSGWRTIQKDKSIEENPIRLTDENGNE
VEYEKGIGTHSTSTIVYDLTDKDYSYFTSYVGVDREMKNSTAASLEFKVYVDGVLKYESG
LMRATDAQKYIELNIDGAKELKLVVTDGRDGNAADHASFGDAKLYTIKDEDANDNYLA

Enzyme Prediction     

No EC number prediction in MGYG000002563_02259.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM51	1763	1904	6.1e-46	0.9925373134328358
CBM51	1539	1676	4e-39	0.9776119402985075
CBM51	1318	1453	2.8e-34	0.9850746268656716

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam08305	NPCBM	5.85e-53	1761	1904	1	135	NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776	NPCBM	8.83e-45	1763	1904	5	144	This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
pfam08305	NPCBM	2.32e-44	1536	1677	1	135	NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
pfam08305	NPCBM	1.06e-40	1315	1454	1	136	NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776	NPCBM	6.41e-39	1535	1677	2	144	This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QJS19250.1	0.0	1	1910	1	1974
AQW26342.1	0.0	3	1911	2	1893
AQM59432.1	0.0	1	1913	1	2197
ABG84962.1	0.0	3	1911	2	1893
AMN32462.1	0.0	3	1911	2	1893

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7JFS_A	1.70e-169	280	1236	27	981	ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JS4_A	5.30e-156	752	1680	49	978	ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JND_A	1.52e-98	31	457	29	449	ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124],7JNF_A Chain A, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JNB_A	3.31e-97	31	457	29	449	ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
5KDJ_A	1.46e-86	662	1314	24	672	ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDJ_B ZmpB metallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q6RUF5	5.04e-08	1764	1915	43	213	Blood-group-substance endo-1,4-beta-galactosidase OS=Clostridium perfringens OX=1502 GN=eabC PE=1 SV=1
P56957	1.25e-06	1484	1778	288	593	Pesticidal crystal protein Cry22Aa OS=Bacillus thuringiensis OX=1428 GN=cry22Aa PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000295	0.999021	0.000170	0.000189	0.000163	0.000144

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002563_02259.