dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002573_00543

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Basic Information help

Species

Ruminococcus_C sp900545285

Lineage

Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp900545285

CAZyme ID

MGYG000002573_00543

CAZy Family

CE3

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
451		48893.76	3.9567

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002573	2234911	MAG	China	Asia

Gene Location

Start: 45707; End: 47062 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000002573_00543.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
CE3	39	179	4e-27	0.5670103092783505

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd01833	XynB_like	4.76e-29	39	289	1	155	SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
pfam00657	Lipase_GDSL	8.51e-12	41	287	1	224	GDSL-like Lipase/Acylhydrolase.
pfam13472	Lipase_GDSL_2	8.18e-11	43	281	1	175	GDSL-like Lipase/Acylhydrolase family. This family of presumed lipases and related enzymes are similar to pfam00657.
cd00229	SGNH_hydrolase	1.26e-08	41	285	1	182	SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
cd14256	Dockerin_I	9.63e-07	391	431	1	41	Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAB55348.1	4.05e-48	17	295	22	264
AWI67000.1	2.71e-34	39	293	98	316
CAA84537.1	9.23e-30	34	302	434	666
AAB69092.1	7.06e-27	39	307	63	290
AAQ10005.1	8.25e-24	39	297	45	265

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2VPT_A	5.90e-14	39	295	6	199	ChainA, LIPOLYTIC ENZYME [Acetivibrio thermocellus]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q9RLB8	8.10e-49	17	295	22	264	Multidomain esterase OS=Ruminococcus flavefaciens OX=1265 GN=cesA PE=1 SV=1
P15329	2.15e-07	139	295	19	141	Putative endoglucanase X (Fragment) OS=Acetivibrio thermocellus OX=1515 GN=celX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001067	0.997671	0.000277	0.000491	0.000257	0.000206

TMHMM Annotations download full data without filtering help

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