logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002575_01202

You are here: Home > Sequence: MGYG000002575_01202

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; ;
CAZyme ID MGYG000002575_01202
CAZy Family GH120
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
631 71156.06 6.7012
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002575 2444047 MAG China Asia
Gene Location Start: 5854;  End: 7749  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002575_01202.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH120 318 409 2.9e-36 0.989010989010989

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 1.84e-07 261 428 13 156
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 8.28e-05 314 448 6 146
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048 NosD 8.37e-04 343 496 30 177
Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ARV16552.1 5.87e-219 1 627 1 644
SDS19086.1 3.30e-213 20 627 24 644
QOY88336.1 6.28e-213 20 627 45 663
AOW11377.1 1.96e-210 11 627 3 627
AUC24119.1 2.25e-193 18 627 1 634

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3VST_A 4.57e-184 22 627 2 638
Thecomplex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_B The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_C The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VST_D The complex structure of XylC with Tris [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_A The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_B The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_C The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSU_D The complex structure of XylC with xylobiose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_A The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_B The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_C The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485],3VSV_D The complex structure of XylC with xylose [Thermoanaerobacterium saccharolyticum JW/SL-YS485]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.007183 0.806744 0.185028 0.000408 0.000288 0.000284

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002575_01202.