dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002579_00340

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Basic Information help

Species

Ligilactobacillus sp900765635

Lineage

Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus; Ligilactobacillus sp900765635

CAZyme ID

MGYG000002579_00340

CAZy Family

GH3

CAZyme Description

Beta-glucosidase BoGH3B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
737	MGYG000002579_3\|CGC4	81588.62	5.2052

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002579	1757018	MAG	China	Asia

Gene Location

Start: 75422; End: 77635 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000002579_00340.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH3	75	294	1.5e-64	0.9768518518518519

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	0.0	8	723	40	751	beta-glucosidase BglX.
COG1472	BglX	5.59e-94	13	419	1	393	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	1.87e-79	17	327	4	316	Glycosyl hydrolase family 3 N terminal domain.
pfam01915	Glyco_hydro_3_C	1.33e-60	367	620	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
PLN03080	PLN03080	5.48e-58	94	727	112	773	Probable beta-xylosidase; Provisional

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QFQ74402.1	7.16e-309	1	735	1	738
ATO54089.1	1.76e-299	1	731	1	733
BBD47993.1	6.09e-290	1	737	1	738
ABJ59802.1	1.33e-279	1	737	19	756
QTH65833.1	5.75e-279	1	737	1	738

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4ZOA_A	1.12e-178	5	735	5	718	CrystalStructure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOA_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with isofagomine [Listeria innocua Clip11262],4ZOB_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOB_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with gluconolactone [Listeria innocua Clip11262],4ZOD_A Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOD_B Crystal Structure of beta-glucosidase from Listeria innocua in complex with glucose [Listeria innocua Clip11262],4ZOE_A Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262],4ZOE_B Crystal Structure of beta-glucosidase from Listeria innocua [Listeria innocua Clip11262]
4ZO6_A	1.78e-177	5	735	5	718	CrystalStructure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO6_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with cellobiose [Listeria innocua Clip11262],4ZO7_A Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO7_B Crystal structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with gentiobiose [Listeria innocua Clip11262],4ZO8_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO8_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorose [Listeria innocua Clip11262],4ZO9_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZO9_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with laminaribiose [Listeria innocua Clip11262],4ZOC_A Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262],4ZOC_B Crystal Structure of mutant (D270A) beta-glucosidase from Listeria innocua in complex with sophorotriose [Listeria innocua Clip11262]
5XXL_A	2.65e-166	9	728	17	743	Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A	1.48e-165	9	728	17	743	CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
6R5I_A	2.60e-165	54	723	47	719	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q56078	2.13e-166	8	723	40	751	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363	6.67e-165	8	725	40	753	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
T2KMH0	4.40e-105	90	725	84	709	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
T2KMH9	4.73e-86	59	735	100	753	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3	3.19e-81	6	730	39	769	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000049	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000002579_00340.