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CAZyme Information: MGYG000002579_01159
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ligilactobacillus sp900765635 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus; Ligilactobacillus sp900765635 | |||||||||||
| CAZyme ID | MGYG000002579_01159 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 18324; End: 19583 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00877 | NLPC_P60 | 3.20e-34 | 317 | 408 | 1 | 92 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| PRK13914 | PRK13914 | 9.78e-32 | 6 | 399 | 5 | 460 | invasion associated endopeptidase. |
| COG0791 | Spr | 1.60e-26 | 240 | 402 | 8 | 177 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
| NF033742 | NlpC_p60_RipB | 1.46e-22 | 290 | 408 | 59 | 197 | NlpC/P60 family peptidoglycan endopeptidase RipB. |
| PRK06347 | PRK06347 | 9.71e-21 | 21 | 219 | 398 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWZ39822.1 | 5.57e-144 | 1 | 419 | 1 | 431 |
| AWZ38852.1 | 5.57e-144 | 1 | 419 | 1 | 431 |
| QIA89089.1 | 6.61e-143 | 1 | 419 | 1 | 432 |
| QHQ70771.1 | 1.45e-136 | 1 | 419 | 1 | 484 |
| QCQ04928.1 | 4.52e-135 | 1 | 419 | 1 | 472 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6B8C_A | 2.30e-40 | 302 | 416 | 25 | 140 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
| 7CFL_A | 4.93e-14 | 307 | 407 | 16 | 122 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 3H41_A | 1.08e-12 | 315 | 402 | 199 | 289 | CRYSTALSTRUCTURE OF A NLPC/P60 FAMILY PROTEIN (BCE_2878) FROM BACILLUS CEREUS ATCC 10987 AT 1.79 A RESOLUTION [Bacillus cereus ATCC 10987] |
| 4Q4T_A | 1.32e-12 | 316 | 402 | 354 | 452 | Structureof the Resuscitation Promoting Factor Interacting protein RipA mutated at E444 [Mycobacterium tuberculosis H37Rv] |
| 3I86_A | 3.01e-12 | 299 | 408 | 2 | 122 | Crystalstructure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis],3I86_B Crystal structure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P13692 | 1.85e-35 | 302 | 416 | 399 | 514 | Protein P54 OS=Enterococcus faecium OX=1352 PE=3 SV=2 |
| O07532 | 7.58e-33 | 31 | 410 | 175 | 477 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| O31852 | 3.27e-27 | 6 | 410 | 2 | 403 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| P54421 | 9.11e-27 | 33 | 414 | 29 | 328 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| Q01835 | 4.91e-21 | 31 | 402 | 176 | 493 | Probable endopeptidase p60 OS=Listeria grayi OX=1641 GN=iap PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000510 | 0.998415 | 0.000228 | 0.000326 | 0.000271 | 0.000227 |