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CAZyme Information: MGYG000002585_01227
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; | |||||||||||
| CAZyme ID | MGYG000002585_01227 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Beta-hexosaminidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 15164; End: 18163 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 104 | 329 | 7.7e-58 | 0.9861111111111112 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00933 | Glyco_hydro_3 | 1.55e-74 | 50 | 362 | 1 | 314 | Glycosyl hydrolase family 3 N terminal domain. |
| COG1472 | BglX | 4.62e-73 | 49 | 433 | 1 | 368 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| PRK03642 | PRK03642 | 5.57e-56 | 579 | 971 | 30 | 395 | putative periplasmic esterase; Provisional |
| pfam00144 | Beta-lactamase | 1.03e-42 | 592 | 972 | 1 | 309 | Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase. |
| COG1680 | AmpC | 1.15e-36 | 588 | 972 | 38 | 364 | CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT65081.1 | 0.0 | 1 | 997 | 2 | 998 |
| QBJ17997.1 | 0.0 | 1 | 997 | 2 | 998 |
| QUU00609.1 | 0.0 | 1 | 997 | 2 | 998 |
| QQA30537.1 | 0.0 | 1 | 997 | 2 | 998 |
| QUT62071.1 | 0.0 | 1 | 997 | 2 | 998 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3BMX_A | 1.22e-61 | 43 | 440 | 36 | 472 | Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis] |
| 3LK6_A | 3.51e-61 | 43 | 440 | 10 | 446 | ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis] |
| 4GYJ_A | 6.36e-61 | 43 | 440 | 40 | 476 | Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168] |
| 6K5J_A | 1.40e-55 | 45 | 406 | 5 | 376 | Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae] |
| 3SQL_A | 2.80e-50 | 84 | 365 | 58 | 346 | CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P40406 | 6.67e-61 | 43 | 440 | 36 | 472 | Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1 |
| P48823 | 6.79e-51 | 74 | 441 | 54 | 450 | Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1 |
| B5RCU8 | 3.58e-40 | 579 | 982 | 30 | 406 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=yfeW PE=3 SV=1 |
| B5F0K5 | 1.20e-39 | 579 | 982 | 30 | 406 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella agona (strain SL483) OX=454166 GN=yfeW PE=3 SV=1 |
| B4TR50 | 1.62e-39 | 579 | 982 | 30 | 406 | Putative D-alanyl-D-alanine carboxypeptidase OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=yfeW PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000373 | 0.998906 | 0.000244 | 0.000151 | 0.000146 | 0.000145 |