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CAZyme Information: MGYG000002594_00124

You are here: Home > Sequence: MGYG000002594_00124

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Streptococcus sanguinis_H
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sanguinis_H
CAZyme ID MGYG000002594_00124
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
365 MGYG000002594_1|CGC2 38185.86 3.8103
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002594 2166519 MAG China Asia
Gene Location Start: 123957;  End: 125054  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002594_00124.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00118 LysM 7.26e-12 51 95 1 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257 LysM 4.46e-11 52 95 1 44
Lysin motif.
pfam01476 LysM 4.26e-09 53 96 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
PRK10783 mltD 0.002 46 99 339 391
membrane-bound lytic murein transglycosylase D; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SQF70283.1 4.41e-202 1 365 1 365
SQF33637.1 2.54e-201 1 365 1 365
SQG29311.1 5.96e-200 1 365 1 365
QLB51147.1 2.82e-198 1 365 1 365
QLB53250.1 1.27e-194 1 365 1 365

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2L9Y_A 5.68e-06 52 99 64 111
Solutionstructure of the MoCVNH-LysM module from the rice blast fungus Magnaporthe oryzae protein (MGG_03307) [Pyricularia oryzae 70-15]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000254 0.999020 0.000199 0.000186 0.000173 0.000148

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002594_00124.