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CAZyme Information: MGYG000002613_00320

You are here: Home > Sequence: MGYG000002613_00320

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000002613_00320
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
861 MGYG000002613_9|CGC1 97843.02 8.0079
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002613 2968338 MAG China Asia
Gene Location Start: 15189;  End: 17774  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 495 852 1e-105 0.9819277108433735
GH28 71 443 2.3e-82 0.9323076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.19e-89 23 370 61 394
Polygalacturonase [Carbohydrate transport and metabolism].
pfam07470 Glyco_hydro_88 1.39e-81 477 854 1 342
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 3.56e-70 503 852 34 354
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 6.67e-28 73 439 1 305
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 8.94e-15 32 391 58 361
polygalacturonase ADPG

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGB29347.1 0.0 2 854 1 853
QNT65241.1 0.0 2 857 1 873
BCS86040.1 0.0 7 852 5 845
VEH16244.1 0.0 7 852 5 851
QIM09915.1 0.0 2 852 1 889

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 1.72e-91 26 467 4 447
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4WU0_A 1.10e-86 503 854 23 361
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
5OLP_A 6.72e-71 41 448 40 436
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1NC5_A 4.38e-57 463 860 2 373
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 2.27e-56 502 860 28 363
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 2.40e-56 463 860 2 373
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
A7PZL3 1.91e-31 62 371 78 358
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
P0A3U7 4.59e-28 658 850 39 227
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1
P0A3U6 4.59e-28 658 850 39 227
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P15922 3.62e-22 48 475 154 586
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000301 0.999071 0.000173 0.000157 0.000155 0.000147

TMHMM  Annotations      download full data without filtering help

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