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CAZyme Information: MGYG000002613_00321

You are here: Home > Sequence: MGYG000002613_00321

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000002613_00321
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
711 MGYG000002613_9|CGC1 77669.73 5.6353
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002613 2968338 MAG China Asia
Gene Location Start: 17908;  End: 20043  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002613_00321.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 75 274 1.3e-74 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.67e-07 22 277 29 302
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 2.08e-04 69 155 3 79
Amb_all domain.
pfam18884 TSP3_bac 0.005 422 443 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEH16322.1 6.39e-163 16 542 22 581
QNT67774.1 2.26e-160 18 496 1 536
AGB28243.1 5.82e-160 19 542 20 579
QCD40778.1 6.65e-160 19 500 17 566
QCP73827.1 6.65e-160 19 500 17 566

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0XMA2 6.80e-44 13 468 9 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 9.33e-44 13 468 9 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
Q0CLG7 2.35e-43 23 468 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 1.16e-42 13 468 9 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 5.43e-42 23 468 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000330 0.998929 0.000179 0.000186 0.000181 0.000158

TMHMM  Annotations      download full data without filtering help

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