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CAZyme Information: MGYG000002621_00697

You are here: Home > Sequence: MGYG000002621_00697

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides ndongoniae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides ndongoniae
CAZyme ID MGYG000002621_00697
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
515 MGYG000002621_5|CGC2 55483 4.7435
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002621 3633256 MAG China Asia
Gene Location Start: 31922;  End: 33469  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002621_00697.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 110 298 6.2e-78 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.38e-09 58 308 29 287
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.28e-04 123 290 15 175
Amb_all domain.
pfam18884 TSP3_bac 0.004 461 479 1 19
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQA07813.1 2.47e-263 51 507 33 490
QUT41970.1 2.02e-262 51 507 33 490
QMW86467.1 8.20e-262 51 507 33 490
ALJ43636.1 8.20e-262 51 507 33 490
AAO79220.1 8.20e-262 51 507 33 490

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2UB83 2.46e-47 55 504 18 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B8NQQ7 3.42e-47 55 504 18 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
A1DPF0 1.79e-45 55 504 19 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q5B297 2.54e-45 59 504 22 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q4WL88 4.79e-45 55 504 19 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000001 0.000529 0.999518 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002621_00697.