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CAZyme Information: MGYG000002663_01553

You are here: Home > Sequence: MGYG000002663_01553

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900772835
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900772835
CAZyme ID MGYG000002663_01553
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
590 64510.51 6.4345
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002663 2098573 MAG United Republic of Tanzania Africa
Gene Location Start: 3079;  End: 4851  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002663_01553.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 80 279 3.5e-71 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 3.88e-09 24 222 29 235
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 3.65e-05 78 239 1 170
Amb_all domain.
pfam18884 TSP3_bac 0.004 468 489 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD40778.1 4.11e-242 24 590 20 599
QCP73827.1 4.11e-242 24 590 20 599
QNT67774.1 1.22e-208 19 589 2 586
VEH16322.1 3.48e-194 24 535 28 531
AGB28243.1 3.65e-191 24 540 23 531

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 5.83e-44 25 514 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 1.49e-42 13 514 11 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 3.89e-42 13 514 11 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 5.36e-42 13 514 11 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q2UB83 7.24e-42 25 514 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000263 0.999051 0.000162 0.000178 0.000167 0.000143

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002663_01553.