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CAZyme Information: MGYG000002668_01648
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900552965 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900552965 | |||||||||||
| CAZyme ID | MGYG000002668_01648 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1056; End: 2468 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 66 | 451 | 1.5e-79 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 2.85e-84 | 35 | 446 | 78 | 491 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02218 | PLN02218 | 1.97e-22 | 40 | 428 | 68 | 405 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 1.14e-21 | 38 | 381 | 22 | 318 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 1.16e-21 | 39 | 402 | 52 | 392 | Probable polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 4.39e-20 | 114 | 355 | 26 | 240 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIM10174.1 | 8.61e-218 | 19 | 466 | 27 | 487 |
| QCP71949.1 | 1.43e-174 | 21 | 470 | 35 | 499 |
| QCD38261.1 | 1.43e-174 | 21 | 470 | 35 | 499 |
| QCD41743.1 | 1.43e-171 | 21 | 462 | 34 | 488 |
| QUT83114.1 | 4.68e-170 | 25 | 457 | 35 | 497 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 5.33e-77 | 19 | 431 | 7 | 436 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 2.77e-58 | 22 | 428 | 27 | 422 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 2UVE_A | 1.45e-31 | 20 | 458 | 137 | 588 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 1BHE_A | 6.02e-17 | 30 | 364 | 6 | 314 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 2.16e-47 | 41 | 428 | 64 | 421 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P15922 | 7.97e-33 | 39 | 453 | 151 | 576 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| P27644 | 8.03e-31 | 196 | 420 | 25 | 249 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| Q949Z1 | 7.88e-23 | 39 | 368 | 79 | 377 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1 |
| Q9LW07 | 4.11e-22 | 38 | 381 | 22 | 318 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000513 | 0.998226 | 0.000680 | 0.000229 | 0.000184 | 0.000161 |