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CAZyme Information: MGYG000002670_01333
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Agathobacter sp900546625 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Agathobacter; Agathobacter sp900546625 | |||||||||||
| CAZyme ID | MGYG000002670_01333 | |||||||||||
| CAZy Family | GH0 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 74620; End: 75882 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam01471 | PG_binding_1 | 2.18e-14 | 345 | 403 | 1 | 54 | Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally. |
| COG3409 | PGRP | 9.05e-08 | 342 | 403 | 41 | 99 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]. |
| COG3409 | PGRP | 2.80e-05 | 336 | 408 | 117 | 185 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]. |
| pfam13620 | CarboxypepD_reg | 7.37e-05 | 16 | 114 | 1 | 81 | Carboxypeptidase regulatory-like domain. |
| COG2989 | YcbB | 7.92e-04 | 346 | 420 | 235 | 308 | Murein L,D-transpeptidase YcbB/YkuD [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VCV21206.1 | 4.17e-204 | 9 | 419 | 8 | 418 |
| ASM69598.1 | 4.42e-197 | 3 | 419 | 5 | 420 |
| QEI32542.1 | 5.78e-195 | 7 | 419 | 16 | 429 |
| QHB25032.1 | 5.78e-195 | 7 | 419 | 16 | 429 |
| QRT31086.1 | 8.80e-195 | 7 | 419 | 18 | 431 |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000046 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |