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CAZyme Information: MGYG000002674_00872

You are here: Home > Sequence: MGYG000002674_00872

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes;
CAZyme ID MGYG000002674_00872
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
445 MGYG000002674_56|CGC1 50749.46 6.188
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002674 2150198 MAG Canada North America
Gene Location Start: 9917;  End: 11254  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002674_00872.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 76 437 1.1e-37 0.4242021276595745

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 3.53e-25 78 434 124 487
beta-galactosidase.
COG3250 LacZ 5.38e-23 88 434 96 431
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 3.85e-21 84 440 119 481
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02836 Glyco_hydro_2_C 5.89e-15 311 434 32 160
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837 Glyco_hydro_2_N 2.93e-06 36 140 32 131
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBL07145.1 8.76e-233 1 445 1 445
BBL00145.1 1.47e-214 1 445 1 453
BBL11042.1 4.20e-214 1 445 1 453
BBL08251.1 4.20e-214 1 445 1 453
AFL78621.1 7.72e-212 1 445 1 452

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 3.08e-29 31 445 91 496
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 2.56e-27 31 445 95 500
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3CZJ_A 6.50e-26 37 434 83 486
ChainA, Beta-galactosidase [Escherichia coli K-12],3CZJ_B Chain B, Beta-galactosidase [Escherichia coli K-12],3CZJ_C Chain C, Beta-galactosidase [Escherichia coli K-12],3CZJ_D Chain D, Beta-galactosidase [Escherichia coli K-12]
3VDA_A 6.59e-26 37 434 112 515
E.coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_B E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_C E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDA_D E. coli (lacZ) beta-galactosidase (N460T) [Escherichia coli],3VDB_A E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_B E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_C E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDB_D E. coli (lacZ) beta-galactosidase (N460T) in complex with galactonolactone [Escherichia coli],3VDC_A E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_B E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_C E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli],3VDC_D E. coli (lacZ) beta-galactosidase (N460T) in complex with IPTG [Escherichia coli]
3VD5_A 6.59e-26 37 434 112 515
E.coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_B E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_C E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_D E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD7_A E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_B E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_C E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_D E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD9_A E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_B E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_C E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_D E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],4DUX_A E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_B E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_C E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_D E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7ZI91 2.66e-25 37 434 84 487
Beta-galactosidase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) OX=331111 GN=lacZ PE=3 SV=1
B7N8Q1 2.66e-25 78 434 124 487
Beta-galactosidase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=lacZ PE=3 SV=1
B1LIM9 2.66e-25 37 434 84 487
Beta-galactosidase OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=lacZ PE=3 SV=1
A7ZWZ1 2.66e-25 37 434 84 487
Beta-galactosidase OS=Escherichia coli O9:H4 (strain HS) OX=331112 GN=lacZ PE=3 SV=1
Q8FKG6 3.56e-25 37 434 84 487
Beta-galactosidase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001473 0.964718 0.032641 0.000533 0.000335 0.000291

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002674_00872.