logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002674_00964

You are here: Home > Sequence: MGYG000002674_00964

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes;
CAZyme ID MGYG000002674_00964
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
439 MGYG000002674_65|CGC1 47903.05 6.3116
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002674 2150198 MAG Canada North America
Gene Location Start: 4472;  End: 5791  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002674_00964.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 80 438 2.8e-105 0.9971830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 8.52e-158 81 438 1 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 1.17e-84 56 438 21 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBL06023.1 2.09e-215 55 439 18 396
BBL12464.1 2.88e-208 56 439 17 405
BBL09670.1 2.88e-208 56 439 17 405
AMP51471.1 2.88e-208 56 439 17 405
BBL01800.1 8.23e-208 56 439 17 405

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4JJA_A 3.80e-146 58 439 3 369
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]
4K05_A 1.27e-40 72 439 25 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 1.24e-69 51 438 31 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000418 0.998871 0.000226 0.000164 0.000148 0.000146

TMHMM  Annotations      download full data without filtering help

start end
12 34