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CAZyme Information: MGYG000002683_01567

You are here: Home > Sequence: MGYG000002683_01567

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; RUG12999; RUG12999; ;
CAZyme ID MGYG000002683_01567
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1233 MGYG000002683_104|CGC1 138817.19 4.7897
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002683 3225682 MAG Canada North America
Gene Location Start: 2545;  End: 6246  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002683_01567.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 1109 1223 1.1e-19 0.9032258064516129

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 1.17e-13 1106 1223 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 5.99e-06 1107 1215 14 134
Substituted updates: Jan 31, 2002
pfam07940 Hepar_II_III 0.007 598 664 37 87
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBH20141.1 8.55e-136 212 1211 228 1207
QOU74174.1 2.93e-124 108 963 93 939
AYM77060.1 1.51e-123 108 963 93 939
QDG70382.1 1.59e-122 108 963 113 959
QHW00380.1 6.23e-122 218 962 66 798

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2FUQ_A 3.73e-110 220 960 19 743
ChainA, heparinase II protein [Pedobacter heparinus],2FUQ_B Chain B, heparinase II protein [Pedobacter heparinus]
3E80_A 3.92e-110 220 960 21 745
Structureof Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_B Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_C Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus]
3E7J_A 1.91e-107 220 960 21 745
ChainA, Heparinase II protein [Pedobacter heparinus],3E7J_B Chain B, Heparinase II protein [Pedobacter heparinus]
2FUT_A 1.18e-103 220 960 20 744
ChainA, heparinase II protein [Pedobacter heparinus],2FUT_B Chain B, heparinase II protein [Pedobacter heparinus]
7D29_A 9.35e-21 1104 1226 11 132
CBM32of AlyQ [Persicobacter sp. CCB-QB2],7D2A_A CBM32 of AlyQ in complex with 4,5-unsaturated mannuronic acid [Persicobacter sp. CCB-QB2]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C6XZB6 3.83e-109 220 960 44 768
Heparin and heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000421 0.539067 0.459810 0.000251 0.000240 0.000197

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002683_01567.