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CAZyme Information: MGYG000002685_00263

You are here: Home > Sequence: MGYG000002685_00263

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA9506; ;
CAZyme ID MGYG000002685_00263
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1316 149835.79 4.4584
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002685 3385444 MAG Canada North America
Gene Location Start: 14211;  End: 18161  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002685_00263.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 842 1011 8.1e-38 0.9497206703910615
CBM32 1189 1308 6.4e-21 0.9112903225806451

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 2.01e-16 1185 1307 1 126
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam16332 DUF4962 4.46e-06 460 623 117 289
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 0.003 844 1007 30 189
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam17132 Glyco_hydro_106 0.010 1156 1295 149 286
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZS17848.1 5.52e-126 411 1312 347 1278
ALS27107.1 1.81e-122 464 1311 678 1511
QUH30172.1 3.47e-117 483 1312 70 894
QNK58643.1 1.58e-112 464 1311 773 1609
QOT12851.1 2.37e-100 462 1311 456 1297

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D29_A 7.92e-17 1198 1314 24 135
CBM32of AlyQ [Persicobacter sp. CCB-QB2],7D2A_A CBM32 of AlyQ in complex with 4,5-unsaturated mannuronic acid [Persicobacter sp. CCB-QB2]
5XNR_A 5.07e-15 1198 1314 24 135
TruncatedAlyQ with CBM32 and alginate lyase domains [Persicobacter sp. CCB-QB2]
2FUQ_A 1.41e-11 486 613 23 148
ChainA, heparinase II protein [Pedobacter heparinus],2FUQ_B Chain B, heparinase II protein [Pedobacter heparinus]
3E7J_A 1.41e-11 486 613 25 150
ChainA, Heparinase II protein [Pedobacter heparinus],3E7J_B Chain B, Heparinase II protein [Pedobacter heparinus]
3E80_A 1.41e-11 486 613 25 150
Structureof Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_B Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_C Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C6XZB6 7.89e-11 486 613 48 173
Heparin and heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000268 0.998986 0.000203 0.000196 0.000170 0.000149

TMHMM  Annotations      download full data without filtering help

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