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CAZyme Information: MGYG000002685_00267

You are here: Home > Sequence: MGYG000002685_00267

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA9506; ;
CAZyme ID MGYG000002685_00267
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1316 MGYG000002685_17|CGC1 146095.92 4.5463
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002685 3385444 MAG Canada North America
Gene Location Start: 5245;  End: 9195  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002685_00267.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 843 1019 1e-49 0.9832402234636871
CBM32 1197 1304 4.3e-19 0.8306451612903226

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 9.72e-15 1198 1296 8 112
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam16332 DUF4962 3.51e-11 437 622 97 289
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 6.32e-07 845 1048 26 215
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
smart00231 FA58C 1.68e-04 1189 1295 5 122
Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
cd00057 FA58C 0.003 1224 1295 47 127
Substituted updates: Jan 31, 2002

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZS17848.1 6.14e-136 309 1316 271 1280
ALS27107.1 7.25e-129 438 1316 654 1514
QUH30172.1 7.74e-124 424 1316 19 896
AYB44936.1 2.34e-120 402 1313 406 1295
QOT12851.1 5.55e-119 402 1313 406 1297

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5ZU6_A 3.50e-16 1176 1311 20 155
ACBM32 derived from alginate lyase B (AlyB-OU02) [Vibrio]
7D29_A 1.74e-15 1201 1313 21 132
CBM32of AlyQ [Persicobacter sp. CCB-QB2],7D2A_A CBM32 of AlyQ in complex with 4,5-unsaturated mannuronic acid [Persicobacter sp. CCB-QB2]
5ZU5_A 2.21e-14 1176 1311 20 155
Crystalstructure of a full length alginate lyase with CBM domain [Vibrio splendidus]
5XNR_A 8.90e-14 1201 1313 21 132
TruncatedAlyQ with CBM32 and alginate lyase domains [Persicobacter sp. CCB-QB2]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000275 0.999003 0.000265 0.000161 0.000146 0.000139

TMHMM  Annotations      download full data without filtering help

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