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CAZyme Information: MGYG000002685_00884
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA9506; ; | |||||||||||
| CAZyme ID | MGYG000002685_00884 | |||||||||||
| CAZy Family | GT84 | |||||||||||
| CAZyme Description | Cyclic beta-(1,2)-glucan synthase NdvB | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 4074; End: 9566 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT84 | 1127 | 1341 | 8.2e-91 | 0.9906976744186047 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd11753 | GH94N_ChvB_NdvB_2_like | 1.35e-79 | 1334 | 1655 | 1 | 330 | Second GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains. The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cyclic beta 1-2 glucan synthetase (EC:2.4.1.20) or ChvB (encoded by the chromosomal chvB virulence gene). This second of two tandemly repeated GH94-N-terminal-like domains has not been characterized functionally. Some beta 1-2 glucan synthetases are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants. |
| pfam06165 | Glyco_transf_36 | 1.61e-59 | 1392 | 1633 | 2 | 246 | Glycosyltransferase family 36. The glycosyltransferase family 36 includes cellobiose phosphorylase (EC:2.4.1.20), cellodextrin phosphorylase (EC:2.4.1.49), chitobiose phosphorylase (EC:2.4.1.-). Many members of this family contain two copies of this domain. |
| cd11756 | GH94N_ChvB_NdvB_1_like | 9.19e-30 | 1397 | 1650 | 35 | 284 | First GH94N domain of cyclic beta 1-2 glucan synthetase and similar domains. The glycoside hydrolase family 94 (previously known as glycosyltransferase family 36) includes cyclic beta 1-2 glucan synthetase (EC:2.4.1.20) or ChvB (encoded by the chromosomal chvB virulence gene). This first of two tandemly repeated GH94-N-terminal-like domains has not been characterized functionally. Some beta 1-2 glucan synthetases are annotated as NdvB (nodule development B) gene products, glycosyltransferases required for the synthesis of cyclic beta-(1,2)-glucans, which play a role in interactions between bacteria and plants. |
| pfam10091 | Glycoamylase | 5.12e-26 | 1127 | 1338 | 1 | 211 | Putative glucoamylase. The structure of UniProt:Q5LIB7 has an alpha/alpha toroid fold and is similar structurally to a number of glucoamylases. Most of these structural homologs are glucoamylases, involved in breaking down complex sugars (e.g. starch). The biologically relevant state is likely to be monomeric. The putative active site is located at the centre of the toroid with a well defined large cavity. |
| COG3459 | COG3459 | 1.11e-18 | 1357 | 1668 | 244 | 575 | Cellobiose phosphorylase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVX30049.1 | 0.0 | 21 | 1827 | 27 | 1936 |
| AVX19642.1 | 0.0 | 21 | 1827 | 27 | 1936 |
| AST58113.1 | 0.0 | 37 | 1829 | 81 | 2035 |
| AGB18242.1 | 0.0 | 37 | 1829 | 81 | 2035 |
| ADL68114.1 | 0.0 | 37 | 1829 | 81 | 2035 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P20471 | 1.24e-261 | 35 | 1819 | 67 | 1994 | Cyclic beta-(1,2)-glucan synthase NdvB OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ndvB PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999022 | 0.000916 | 0.000074 | 0.000003 | 0.000002 | 0.000012 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 4 | 18 |
| 291 | 313 |
| 318 | 340 |
| 712 | 734 |
| 763 | 785 |
| 840 | 862 |