logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002685_01908

You are here: Home > Sequence: MGYG000002685_01908

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA9506; ;
CAZyme ID MGYG000002685_01908
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
795 88769.64 4.7205
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002685 3385444 MAG Canada North America
Gene Location Start: 2003;  End: 4390  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002685_01908.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 5 792 5.6e-95 0.9089805825242718

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 7.21e-27 56 608 326 864
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 6.93e-05 426 518 1 87
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASR47547.1 3.78e-222 1 790 64 860
AIQ53992.1 3.64e-221 1 793 64 864
AIQ48514.1 4.95e-219 1 793 64 866
ANY67834.1 1.85e-217 1 794 65 879
APQ61832.1 1.18e-215 1 794 64 869

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.15e-21 89 790 409 1136
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 3.17e-13 484 790 783 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 3.17e-13 484 790 783 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000074 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002685_01908.