CAZyme Information: MGYG000002704_00372

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Dysosmobacter
• CAZyme ID: MGYG000002704_00372
• CAZy Family: CBM54
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1636		173796.59	4.4374

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002704	2615514	MAG	Canada	North America

• Gene Location: Start: 66781; End: 71691 Strand: +

Full Sequence      

MSRWRILGGSLRRRAAALLLAAVMCISLAAPSAAAASATASAAATSSTLQPYLDKIVSWG
VMRGDINGNLNPERTITRAEFVTMINRAFGFSRTGTTPFRDVPASAWYSEDVGIAYTIGY
INGTTATTFSPYSSVTREQAAVILARILMLQPTVGENTDFTDSRLLGNWSRGLIGAATDY
HIINGYADGSFRPKNAITRGAAAILIVNAIGTPIQKAGDYTLGSTWGNVTITASGVTLRN
TVIGGNLYISEGVDLGNVTLENVTVLGEIVVSGGGASEGGDDSIVLRNVSAQKLVVDNTK
NQLVSLRVEGDGKIPETAVRTNAYLSDRTGDGDGLARITLDGQEEGLSLTLSGNIKEAVV
AAPKATVNLAAGQAQTITVDEKSTGSTLNIAAGAMAQTVNLDTGAKVTGSGDIASLNVNA
AGSTVTMLPDQITIRPGITANISGETMDTQAAAESSADPRLSAGYPKITDLAPTSAVAQF
AANKKGTIYWAVTAVTDGSVDAEELVNPSSYNPKIVKQGSVSLSGSSQTASANISGLTSD
GSYYLSAVLVDARDQRSPLKVISFSTPDNTKPDFASGYPYMSKITSTSGQVTVMPTKTCR
LYYAVLPKGASAPTANDFKANAVTGNLGFGVLDVTKNTTYTFNVNSVPLEELKSYDVYLW
LTDVDGGQSSAVKKLNFTTVDGTPPVFNTDPTVNSVKETSVGLYANLNEAGTLYWVVVEH
GETYPKPIQGSGAVDLSSDEAKLQVMAGMNALKSGKVSMTGNKDVSFSVSGLEAEKSYDL
YYVAQDKAGNYSASVEMVEIHTLDNSAPTVTQEFTKYNGTDTASPLPDSDVRLVFSEAVQ
TADTHTALADLYEKVNQTVGQGQAETDARAAMALALSKAIYLYQVPASSQPVKVDGYTGS
NQTGDDWTIDYRYATITLEEGKTVVTFPAGKGINLKSGATYYFEIQANTIADTSTAFNVM
GKTALDRFTTVFAQVNLSTLNENSITYTSSASESSVTVPADVSWRLDPVSTGKVDGSMDW
DMLIWSDTSVEFQLFCREVTGSSAGAWQLLGTQDITVPDGVTGYRGVSLTRDFLQSGSSN
PDFEPLNTLKEGTAYEYAISFTKVAGIADPAPRKGVWSQRINLKVYVAAGSDNDLGFLTA
NVTEENWAEALKDGVTNIGLPSDFSLRKQFTDNQAPTFIGGYPEFTAGDSTVEMRLMLDR
PGTVYYVVAPMGTVSTVSKDGKVNYGTKENWQTLPKSGAQDETQPPELGSPDYLNIVNAS
SNYRNDRIKYGVVECGSSVEVELVDGLDKTTPYTVYFVLQGTSQTYSQVLAYQFSTQDVG
KPKITLNNYSPSVNFQTDSTADLNYVLIASNEIPSVLKEPFNPSTYVDNSKLTAWNNFIG
SSGKTFTVLTALCTTYSNGYSVFDEFAKSEDESNIRSTVEDLISGTATLGATIAAQGSKS
LTQGNSYRQEQNFTNNMTGGTLYYCLASAVSPLGSETSFAGISGVYIPDKTPPELQSVST
SATLSGANVYSGTVTFVFDEPVYQLVTQGGVDQTPMQVWQSQYSISTSDASVAVRLDRII
GSSHLSSFSCANEVRKPSSTLTLSFKDIPLNATIVLFDNSFICDANSNSTRQNLTFRLEK
SSIGLVDSGVAFVQVK

Enzyme Prediction     

No EC number prediction in MGYG000002704_00372.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM54	208	323	2.8e-24	0.956140350877193

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033190	inl_like_NEAT_1	3.89e-07	67	210	609	752	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	1.06e-06	99	140	1	42	S-layer homology domain.
pfam00395	SLH	4.13e-05	160	202	1	42	S-layer homology domain.
NF033190	inl_like_NEAT_1	8.73e-04	53	144	655	748	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	0.003	51	81	12	42	S-layer homology domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QQR07714.1	0.0	52	1624	41	1603
QIA32369.1	0.0	52	1624	41	1603
BCK84769.1	0.0	49	1523	46	1536
QQR30851.1	5.65e-227	46	1618	37	1767
ASB41592.1	5.65e-227	46	1618	37	1767

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GZT_A	1.18e-09	197	275	26	106	CrystalStructure of Chitinase ChiW from Paenibacillus sp. str. FPU-7 Reveals a Novel Type of Bacterial Cell-Surface-Expressed Multi-Modular Enzyme Machinery [Paenibacillus sp. FPU-7]
6BT4_A	1.01e-07	99	219	26	150	Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis]
3PYW_A	1.02e-07	99	219	5	129	Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P38537	1.45e-15	53	210	47	206	Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1
P38536	3.73e-13	53	219	1694	1860	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
C6CRV0	6.01e-13	53	206	1296	1455	Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P19424	5.84e-10	75	209	17	147	Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
Q06852	9.60e-10	62	210	2104	2264	Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000515	0.998599	0.000224	0.000247	0.000204	0.000180

TMHMM  Annotations     

start	end
17	39