CAZyme Information: MGYG000002711_02738

Basic Information

• Species: UMGS856 sp900546265
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UMGS856; UMGS856 sp900546265
• CAZyme ID: MGYG000002711_02738
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
745	MGYG000002711_34|CGC1	83098.59	4.8026

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002711	3636319	MAG	Canada	North America

• Gene Location: Start: 4002; End: 6239 Strand: -

Full Sequence      

MEFPMQFIRATSVTGTHEAPVPAPYLRRAFEVKEACQGRLLIGALGFYELYLNGRRITKG
ALAPYISNPDDIVYYDSYELALQAGENVLGLWLGNGFQNNPGGHIWDFDKARFRGAPQVA
LRLTYTGPDGTERTLESDDSFRTAPSPVLFDDYRFGEHYDARLELPGWNAPGFDDSGWQP
ALPAPMPRGEARLCEAEPIVVTDELKPISILPEGDGYRYDFGKNCAGVCRLTIRGQAGQR
VELLHGEYLEDGKLTVRNIWFGDNPLVHRDVYICKGEGEETYTPSFTYHGFQYVLVTGIT
PEQATPDLLTYVVMNSDLKERGGFTCSDPTVNTLQELTRRSDLANFYYFPTDCPQREKNG
WTADAALSSEHLLLNLSPETSYREWMRNICKAMDDRGALPGIVPTGGWGFHWGNGPAWDN
VLLYLPYFVYLYRGDKTILEESAASILRYLHYLTTRVNEEGLIKIGLGDWCPPARGSDQY
KAPLEFTDTVLSMDIAEKAAYIFGVLGMAPQQTFAASLAAQFRAAVRERLVDFSTMTAAG
NCQTSQAMALFYGVFEPGERPAAFDRLLRLIEEQDGHMDTGVLGGRVIFHVLTDFGRSDL
AFNMIVRPDFPSYGNWVARGATSLWEDFQPEGGDVTSHNHHFWGDISSWFIQALAGIRFN
PHRRSLLEADIRPSFVPQLDSASGFHLAPAGKIASSWVREGGEIRLTVEFPADMTGRISL
EPGYVFDDGLAVKPAASGEYRIHTV

Enzyme Prediction     

No EC number prediction in MGYG000002711_02738.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	213	720	2.3e-125	0.9880952380952381
CBM67	17	182	4.9e-33	0.8806818181818182

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.77e-71	319	654	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	7.56e-44	33	203	1	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	4.55e-24	214	313	4	101	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	4.14e-07	671	720	14	63	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGQ94103.1	4.57e-164	18	728	138	857
AHF16194.1	1.16e-151	9	723	158	863
QEM02329.1	7.20e-149	22	736	157	875
QTE48931.1	7.20e-149	22	736	157	875
QTE66516.1	7.20e-149	22	736	157	875

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	3.58e-94	23	718	176	896	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
3W5M_A	2.64e-87	19	741	296	1027	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	2.06e-73	9	701	121	820	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KPL4	4.29e-92	14	720	170	906	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
Q82PP4	1.22e-86	19	741	296	1027	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
P9WF03	7.83e-72	11	710	158	870	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KNB2	6.44e-69	13	720	163	878	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000040	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002711_02738.