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CAZyme Information: MGYG000002719_01139

You are here: Home > Sequence: MGYG000002719_01139

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; HGM11514; HGM11514; ;
CAZyme ID MGYG000002719_01139
CAZy Family GH26
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
652 74231.73 4.4887
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002719 3080250 MAG Canada North America
Gene Location Start: 5789;  End: 7747  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002719_01139.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 214 378 2.6e-23 0.45874587458745875

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07833 Cu_amine_oxidN1 1.72e-32 558 650 1 93
Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.
pfam07833 Cu_amine_oxidN1 7.95e-13 538 588 43 93
Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.
COG4124 ManB2 4.04e-05 215 310 156 257
Beta-mannanase [Carbohydrate transport and metabolism].
pfam02156 Glyco_hydro_26 3.88e-04 235 362 151 284
Glycosyl hydrolase family 26.
PRK14696 tynA 0.006 563 634 1 72
primary-amine oxidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMJ39775.1 3.52e-69 16 521 16 523
ALS21301.1 1.41e-60 87 652 107 668
BAD39558.1 1.71e-59 77 652 12 588
AUO19576.1 2.61e-56 133 650 54 579
AEI42662.1 2.70e-55 198 650 235 666

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000190 0.999241 0.000152 0.000144 0.000134 0.000130

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002719_01139.