dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002719_01349

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Species

Lineage

Bacteria; Firmicutes_A; Clostridia; HGM11514; HGM11514; ;

CAZyme ID

MGYG000002719_01349

CAZy Family

GH29

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
351		40958.25	4.7442

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002719	3080250	MAG	Canada	North America

Gene Location

Start: 7294; End: 8349 Strand: -

No EC number prediction in MGYG000002719_01349.

Family	Start	End	Evalue	family coverage
GH29	17	329	2.1e-59	0.8526011560693642

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
smart00812	Alpha_L_fucos	1.29e-39	26	222	27	258	Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
pfam01120	Alpha_L_fucos	7.04e-39	26	333	26	330	Alpha-L-fucosidase.
COG3669	AfuC	1.41e-36	7	341	4	320	Alpha-L-fucosidase [Carbohydrate transport and metabolism].
pfam14871	GHL6	6.36e-04	59	137	1	78	Hypothetical glycosyl hydrolase 6. GHL6 is a family of hypothetical glycoside hydrolases.

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRO24265.1	1.46e-98	4	333	23	349
QCQ35196.1	9.14e-98	7	333	24	347
QTO26593.1	9.14e-98	7	333	24	347
QCQ30777.1	9.14e-98	7	333	24	347
QOD59462.1	3.13e-97	7	327	24	341

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4ZRX_A	2.68e-39	2	329	19	350	Crystalstructure of a putative alpha-L-fucosidase (BACOVA_04357) from Bacteroides ovatus ATCC 8483 at 1.59 A resolution [Bacteroides ovatus ATCC 8483]
6ORG_A	2.26e-35	14	328	10	316	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6OR4_A	1.13e-34	14	328	10	316	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6ORF_A	1.15e-34	14	328	10	316	Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORF_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
5K9H_A	7.95e-33	9	320	37	341	Crystalstructure of a glycoside hydrolase 29 family member from an unknown rumen bacterium [unidentified]

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q8GW72	9.92e-36	14	329	37	338	Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
Q7XUR3	1.09e-30	7	329	36	339	Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2
P10901	5.81e-17	26	338	41	360	Alpha-L-fucosidase OS=Dictyostelium discoideum OX=44689 GN=alfA PE=3 SV=1
P17164	7.45e-12	26	220	53	283	Tissue alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca1 PE=1 SV=1
Q9VTJ4	1.06e-11	26	182	54	242	Putative alpha-L-fucosidase OS=Drosophila melanogaster OX=7227 GN=Fuca PE=2 SV=2

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000001	0.000001	0.000000	0.000000	0.000000	0.000000

There is no transmembrane helices in MGYG000002719_01349.